DRSC/TRiP Functional Genomics Resources

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Protein Alignment trx and MEA

DIOPT Version :10

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:NP_563658.1 Gene:MEA / 839422 AraportID:AT1G02580 Length:689 Species:Arabidopsis thaliana


Alignment Length:814 Identity:156/814 - (19%)
Similarity:300/814 - (36%) Gaps:240/814 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  2962 IPAQTQQ--QQLQQAQMIHIPQQQQPLQQQQVQVQPSMPIITLAEAPVVQSQFVMEPQALEQQEL 3024
            :|.:..|  :|:::.:.:||.      ::.:::..||:    ...|...||..:.:|.|      
plant    13 LPPELNQIKEQIEKERFLHIK------RKFELRYIPSV----ATHASHHQSFDLNQPAA------ 61

  Fly  3025 ANRVQHFSTSSSSSSSNCSLPTNVVNPMQQQAPSTTSSSTTRPTNRVLPMQQ---RQEPAP--LS 3084
                     ...:...|.||.:.:.||::..:.|:..:| ......||...|   .:|..|  |.
plant    62 ---------EDDNGGDNKSLLSRMQNPLRHFSASSDYNS-YEDQGYVLDEDQDYALEEDVPLFLD 116

  Fly  3085 NECPVVSSPTPPKPVEQPIIHQMTSASVSKCYAQKSTLPSPVYEAELKVSSVLESIVPDVTMDAI 3149
            .:.|::.|      |:.||:.:: ..|::..:.:.|.|             :.||       |::
plant   117 EDVPLLPS------VKLPIVEKL-PRSITWVFTKSSQL-------------MAES-------DSV 154

  Fly  3150 LEEQPVTESIYTEGLYEKNSPGESKTEQLLLQQQQREQLNQQ-------------LVNNGYLLDK 3201
            :.::.:   .|..|...:.|..|.:.:    :::..|::.::             .|...|.||.
plant   155 IGKRQI---YYLNGEALELSSEEDEED----EEEDEEEIKKEKCEFSEDVDRFIWTVGQDYGLDD 212

  Fly  3202 HTFQ---VEPMDTDV------YREEDLEEE--EDEDDDFSLKMATSA-----------------C 3238
            ...:   .:.::.||      |.|..|:.:  ..|..|.:.|..|:|                 |
plant   213 LVVRRALAKYLEVDVSDILERYNELKLKNDGTAGEASDLTSKTITTAFQDFADRRHCRRCMIFDC 277

  Fly  3239 NDHEMSDSEEPAVKDKISKILDNLTNDDCAD-------SIATAT-TMEVDASAGYQQMVEDVLAT 3295
            :.||..:.|..:.:|| |.:.::.....|::       |:..|. .|:.|.|...:.:|.|...|
plant   278 HMHEKYEPESRSSEDK-SSLFEDEDRQPCSEHCYLKVRSVTEADHVMDNDNSISNKIVVSDPNNT 341

  Fly  3296 TAAQSAPTEEFEGALETAAVEAAATYINEMADAHVLDLKQLQNGVELELRRRKEEQRTVSQEQEQ 3360
               ...|.|:   .|....:|   .:.....|..:..|:.|:..:|:....|:::|.|:|.:..:
plant   342 ---MWTPVEK---DLYLKGIE---IFGRNSCDVALNILRGLKTCLEIYNYMREQDQCTMSLDLNK 397

  Fly  3361 SKAAIVPTAAAPEPPQPIQEPKKMTGPHLLYEIQSEDGFTYKSSSITEIWEKVFEAVQVARRAHG 3425
            :                                      |.:.:.:|:         :|:|::. 
plant   398 T--------------------------------------TQRHNQVTK---------KVSRKSS- 414

  Fly  3426 LTPLPEGPLADMGGIQMIGLKTNALKYLIEQLPGVEKCSKYTPKYHKRNGNVSTAANGAHGGNLG 3490
                           :.:..|:...|| ....|.::|.:....|::|.                 
plant   415 ---------------RSVRKKSRLRKY-ARYPPALKKTTSGEAKFYKH----------------- 446

  Fly  3491 GSSASAALSVSGGDSHGLLDYGSDQDELEENAYDCARCEPYSNRSE--YDMFSWL-----ASRHR 3548
             .:.....|..|.....|         ..||.     ||.|...|:  .:.|...     ...:|
plant   447 -YTPCTCKSKCGQQCPCL---------THENC-----CEKYCGCSKDCNNRFGGCNCAIGQCTNR 496

  Fly  3549 KQPIQVFVQPSDNELVPR------RGTGSNLPMAMKYRTLK---ETYKDYVGVFRSHIHGRGLYC 3604
            :.|.....:..|.:|...      .||....|:.::.:.::   :|.|..: :.:|.:||.|.:.
plant   497 QCPCFAANRECDPDLCRSCPLSCGDGTLGETPVQIQCKNMQFLLQTNKKIL-IGKSDVHGWGAFT 560

  Fly  3605 TKDIEAGEMVIEYAGELIRSTLTDKRERYYDSRGIGCYMFKIDDNLVVDATMRGNAARFINHCCE 3669
            ...::..|.:.||.||||.....::|.|..|..| ..|:|.::|.|.:||..:||..:|:||...
plant   561 WDSLKKNEYLGEYTGELITHDEANERGRIEDRIG-SSYLFTLNDQLEIDARRKGNEFKFLNHSAR 624

  Fly  3670 PNCYSKVVDILGHKHIIIFALRRIVQGEELTYDY 3703
            ||||:|::.:.|.:.|.:||.|.|.:||||.:||
plant   625 PNCYAKLMIVRGDQRIGLFAERAIEEGEELFFDY 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:413390
PRK13914 <1006..>1224 CDD:237555
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134
FYRN 1890..1937 CDD:461787
FYRC 3388..3476 CDD:197781 11/87 (13%)
SET_KMT2A_2B 3575..3726 CDD:380947 45/132 (34%)
MEANP_563658.1 preSET_CXC 485..515 CDD:408079 4/29 (14%)
SET_EZH 544..660 CDD:380917 44/117 (38%)
Blue background indicates that the domain is not in the aligned region.

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