DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trx and SUVR2

DIOPT Version :10

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:NP_974880.1 Gene:SUVR2 / 834422 AraportID:AT5G43990 Length:740 Species:Arabidopsis thaliana


Alignment Length:770 Identity:156/770 - (20%)
Similarity:244/770 - (31%) Gaps:292/770 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly  3153 QPVTESIYTEGLYEKNSPGESKTEQLLLQQQQREQLNQQLVNNGYLLDKHTFQV----EPMDTDV 3213
            :||.:::.  .|||||       .:|:.:...|       |....:.|.|..|.    |....|.
plant    48 KPVLKNLL--ALYEKN-------WELIAEDNYR-------VLADAIFDSHEDQAIQESEEKKADE 96

  Fly  3214 YRE----------------EDLEEEED--EDDDFSLK-----------MATSAC----------- 3238
            .:|                |.:|::||  .:.|..||           :|:.:.           
plant    97 VKEDEGCAAEVDRGKKKLHESIEDDEDVMAESDRPLKRLRRRGEGGSALASPSLGSPTLEGPSIN 161

  Fly  3239 -----------------NDHEMSD----SEEPAVKDKISKILDNLTNDDCADSIATATTMEVDAS 3282
                             |||:..:    ..||.....:|.|.|::...|       ::.:|:|.|
plant   162 DEENAPILLPYHPVPIENDHDAGELILTKVEPITNMPLSSIPDSVDRGD-------SSMLEIDKS 219

  Fly  3283 AGYQQ------------MVEDVLATTAA-----QSAPTEEFEGALETAAVEAAATYINEMADAHV 3330
            .|:.:            ...|:..||.|     :.|.|.|...|||.|:..:....||       
plant   220 NGHVEEKAGETVSTADGTTNDISPTTVARFSDHKLAATIEEPPALELASSASGEVKIN------- 277

  Fly  3331 LDLKQLQNGVELELRRRKEEQRTVSQEQEQSKAAIVPT----------------AAAPEPPQPIQ 3379
            |.......|....|...:|.:|.:.::..:|...:.|.                .|........|
plant   278 LSFAPATGGSNPHLPSMEELRRAMEEKCLRSYKILDPNFSVLGFMNDICSCYLDLATNGRDSANQ 342

  Fly  3380 EPKKM----TGPHLLYEIQSEDGFTYKSSSITEIWEKVFEAVQVARRAH-------------GLT 3427
            .||.:    |....|.:..:...:|.::|:         :.|::....|             .|.
plant   343 LPKNLPFVTTNIDALKKSAARMAYTSQASN---------DVVEICSNEHMRDAENGAVGDSMALV 398

  Fly  3428 PLPEGPL--------ADMGGIQMIGLKTNALKYLIEQLPGVEKCS-KYTPKYHK----------- 3472
            .:||..|        :.:|.|. :|.:|       .::|.|.:.: |..|.:|.           
plant   399 VVPECQLSADEWRLISSVGDIS-LGKET-------VEIPWVNEVNDKVPPVFHYIAQSLVYQDAA 455

  Fly  3473 ---RNGNV--STAANGAHGGNLGGSSASAALSVSGGDSH---GLLDYGSDQDELEE---NAYD-- 3524
               ..||:  ....:...|..|..|.|....:...|.::   |||    .:|.||:   .|.|  
plant   456 VKFSLGNIRDDQCCSSCCGDCLAPSMACRCATAFNGFAYTVDGLL----QEDFLEQCISEARDPR 516

  Fly  3525 ------CARCEPYSNRSEYDMFSWLASRHRKQPIQVFVQPSDNELVPRRGTGSNLPMAMKYRTLK 3583
                  |..|.....:.|                 |.::|....|              |.:.:|
plant   517 KQMLLYCKECPLEKAKKE-----------------VILEPCKGHL--------------KRKAIK 550

  Fly  3584 ETYKDYVG--------VFRSHIH------------GRGLYCTKDIEAGEMVIEYAGELI------ 3622
            |.:.. .|        |.:..||            |.||...:.:..|..|.|.|||::      
plant   551 ECWSK-CGCMKNCGNRVVQQGIHNKLQVFFTPNGRGWGLRTLEKLPKGAFVCELAGEILTIPELF 614

  Fly  3623 -----RSTLTDKRERYYDSRGIGCYMFKIDDN-LVVDATMRGNAARFINH-CCEPNCYSKVVDIL 3680
                 |.|.....:.|:.|..|..     ||. |.::.|..||.:||||| |.:.|    :::|.
plant   615 QRISDRPTSPVILDAYWGSEDISG-----DDKALSLEGTHYGNISRFINHRCLDAN----LIEIP 670

  Fly  3681 GHK--------HIIIFALRRIVQGEELTYDYKFPFEDEKIP-----CSCGSKRCR 3722
            .|.        |:..|..|.|...||||:||..||..:..|     |.|||..||
plant   671 VHAETTDSHYYHLAFFTTREIDAMEELTWDYGVPFNQDVFPTSPFHCQCGSDFCR 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:413390
PRK13914 <1006..>1224 CDD:237555
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134
FYRN 1890..1937 CDD:461787
FYRC 3388..3476 CDD:197781 18/123 (15%)
SET_KMT2A_2B 3575..3726 CDD:380947 55/194 (28%)
SUVR2NP_974880.1 WIYLD 29..83 CDD:431288 12/50 (24%)
SET_SETDB-like 440..702 CDD:380936 68/306 (22%)
Blue background indicates that the domain is not in the aligned region.

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