DRSC/TRiP Functional Genomics Resources

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Protein Alignment trx and SDG14

DIOPT Version :10

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:NP_191733.3 Gene:SDG14 / 825347 AraportID:AT3G61740 Length:1018 Species:Arabidopsis thaliana


Alignment Length:156 Identity:68/156 - (43%)
Similarity:96/156 - (61%) Gaps:9/156 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly  3577 MKYRTLKETYKDYVGVFRSHIHGRGLYCTKDIEAGEMVIEYAGELIRSTLTDKRERYYDSRGIGC 3641
            :|:....|.::...|  :|.|||.||:..|.|:.|||:|||.|..:|.::.|.||..|.|:|..|
plant   866 LKHLQRTENFRVCFG--KSGIHGWGLFARKSIQEGEMIIEYRGVKVRRSVADLREANYRSQGKDC 928

  Fly  3642 YMFKIDDNLVVDATMRGNAARFINHCCEPNCYSKVVDILG---HKHIIIFALRRIVQGEELTYDY 3703
            |:|||.:.:|:|||..||.||.|||.|.||||:::|. :|   ...|::.|...:..||||||||
plant   929 YLFKISEEIVIDATDSGNIARLINHSCMPNCYARIVS-MGDGEDNRIVLIAKTNVAAGEELTYDY 992

  Fly  3704 KFPF---EDEKIPCSCGSKRCRKYLN 3726
            .|..   |:.|:||.|.:..|||::|
plant   993 LFEVDESEEIKVPCLCKAPNCRKFMN 1018

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:413390
PRK13914 <1006..>1224 CDD:237555
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134
FYRN 1890..1937 CDD:461787
FYRC 3388..3476 CDD:197781
SET_KMT2A_2B 3575..3726 CDD:380947 67/154 (44%)
SDG14NP_191733.3 PWWP_AtATX3-like 188..292 CDD:438971
PHD_TCF19_like 365..415 CDD:276992
COG5141 <518..>765 CDD:227470
ePHD_ATX3_4_5_like 603..714 CDD:277133
SET_SETD1-like 862..1014 CDD:380916 64/150 (43%)
Blue background indicates that the domain is not in the aligned region.

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