DRSC/TRiP Functional Genomics Resources

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Protein Alignment trx and ATX1

DIOPT Version :9

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:NP_850170.1 Gene:ATX1 / 817721 AraportID:AT2G31650 Length:1062 Species:Arabidopsis thaliana


Alignment Length:226 Identity:95/226 - (42%)
Similarity:128/226 - (56%) Gaps:20/226 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly  3521 NAYDCARCEPYS-----NRSEYDMFSWLASRHRKQPIQVFVQPSDNEL------------VPRRG 3568
            |...|||.|||:     .|.|.:..:..:|:......|.:|....:.|            |.:..
plant   813 NPSGCARTEPYNCFGRRGRKEPEALAAASSKRLFVENQPYVIGGYSRLEFSTYKSIHGSKVSQMN 877

  Fly  3569 TGSN-LPMAMKYRTLKETYKDYVGVFRSHIHGRGLYCTKDIEAGEMVIEYAGELIRSTLTDKRER 3632
            |.|| |.||.|||.::|||:..:...:|.|||.|::......||:|:|||.|||:|.::.||||:
plant   878 TPSNILSMAEKYRYMRETYRKRLAFGKSGIHGFGIFAKLPHRAGDMMIEYTGELVRPSIADKREQ 942

  Fly  3633 --YYDSRGIGCYMFKIDDNLVVDATMRGNAARFINHCCEPNCYSKVVDILGHKHIIIFALRRIVQ 3695
              |....|.|.|||:|||..|:|||..|:.|..|||.|.|||||:|:.:.|.:||||||.|.|.:
plant   943 LIYNSMVGAGTYMFRIDDERVIDATRTGSIAHLINHSCVPNCYSRVITVNGDEHIIIFAKRHIPK 1007

  Fly  3696 GEELTYDYKFPFEDEKIPCSCGSKRCRKYLN 3726
            .|||||||:|....|::.||||...||..:|
plant  1008 WEELTYDYRFFSIGERLSCSCGFPGCRGVVN 1038

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:295381
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134
FYRN 1891..1935 CDD:283589
FYRC 3388..3476 CDD:197781
SET 3590..3710 CDD:214614 61/121 (50%)
ATX1NP_850170.1 TUDOR <215..248 CDD:295375
PWWP 299..389 CDD:279227
FYRN 448..497 CDD:283589
FYRC 508..597 CDD:295414
PHD_ATX1_2_like 611..657 CDD:276969
ePHD_ATX1_2_like 668..784 CDD:277132
SET 898..1017 CDD:214614 60/118 (51%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1076
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.870

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