DRSC/TRiP Functional Genomics Resources

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Protein Alignment trx and setd1a

DIOPT Version :10

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:XP_021329647.2 Gene:setd1a / 556535 ZFINID:ZDB-GENE-080521-4 Length:2253 Species:Danio rerio


Alignment Length:1870 Identity:387/1870 - (20%)
Similarity:642/1870 - (34%) Gaps:512/1870 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  2090 SICDEDTRNSNTSLGNGWPASNPVEDAMLS---AARNSSQVQMLKTLAWPKLDGNSAMATAIKRR 2151
            ||....|..|:|||.:..|:|.    |.||   ..|:||........:.|.:..:|::.:.|: .
Zfish   663 SIPSSSTSPSSTSLPHHLPSST----ASLSPPPPQRDSSPEPDSTNESLPFMHHSSSLDSRIE-M 722

  Fly  2152 KLSKNLAEGVFLTLSSQQRNKKEMATVAGVSRRQSISETSVEGVATTSGSVRSKSFTWSAAKRYF 2216
            .|.:..|:..||....:...|.|:       |.:..||.|.:|    ...:|.     ...:|..
Zfish   723 LLKEQKAKFSFLASDDEDDEKDEV-------RERGKSENSKDG----GNKLRE-----HGGERPS 771

  Fly  2217 EKSEGREEAAKMRIMQMDGVDDSITEFRIISGDGNLSTAQFSGQVKCDRCQCTYRNYDAFQRHLP 2281
            .|.:|..||.:.|              |....||..|..                          
Zfish   772 HKRQGEMEAGQQR--------------RRGEKDGRRSRG-------------------------- 796

  Fly  2282 SCSPTMSSNETESDVSGQGMTNNATQISAESLNELQKQLLANAGGLNYLQSATSFPQVQSLGSLG 2346
                       :..|||.|                       .|.....:.|:|.|.|.||.|  
Zfish   797 -----------KRQVSGVG-----------------------EGRKTPPEVASSTPTVHSLVS-- 825

  Fly  2347 QFGLQGLQQLQLQPQSLGSGFFLSQPNPATQANTDDLQ-------IYANSLQSLAANLGGGFTLA 2404
             ..|||    |:.|             |..:..|.|..       .|....|....:.|....::
Zfish   826 -ESLQG----QIPP-------------PQEEHTTSDTHRAPHTPPTYNGEAQPSPRSSGEDMEIS 872

  Fly  2405 QP---TVTAPAQPQLIAVSTNPDGTQQFIQIPQTMQATTTPTA-TYQTLQATNTDKKI-MLPLTA 2464
            ..   |:|........:.|::|..:.|.:...||...:.:|.. |.|...||.....| ..|...
Zfish   873 DEDDNTITTATSHPAASSSSSPAASSQTVLPSQTTDPSASPAPDTSQHFSATMPPPPIPSYPPHL 937

  Fly  2465 AGKPLKTVATKAAQQAAVKQRQLKSGHQVKPIQAKLQPHPQ------QHQQQQQTQVQ------- 2516
            ...||...:.:......           :.|....::.||:      .|.....:.::       
Zfish   938 PPPPLPGFSLQPPPPPG-----------IPPPLPHMELHPEYPPPLPHHMYDYASSMELMSQYCG 991

  Fly  2517 -QPITVMGQNLLQP---QLLFQSSTQTQAPQIILPQA--------------------QPQNIISF 2557
             .|::...|..:..   |:...||..|.||...:|.|                    .|.:  .:
Zfish   992 GAPMSFQMQTHMLSRLHQMRMASSNSTAAPPAEVPPASEYPPSYHLHSIPPPHAPPHHPHH--PY 1054

  Fly  2558 VTGDGS----QGQPLQYISIPTAGEYKPQPQPTATPTFLTTAPGAGATYLQTDASGNLVLTTTPS 2618
            :..||:    ..|..:||..|....| |.|.....|...|..|.      .|....:|:....||
Zfish  1055 MDQDGNVASHYDQDHRYIPPPLPYAY-PDPHAAQLPHHHTIPPP------HTPWPPHLLPQQFPS 1112

  Fly  2619 NSGLQMLTAQSLQAQPQVIGTLIQPQTIQLGGGADGNQPGSNQQPLILGGTGGGSSGLEFATTSP 2683
            :     .......|.|.|.|.|.         ||.|:|                           
Zfish  1113 H-----YPPPGFGAVPGVDGELY---------GAAGDQ--------------------------- 1136

  Fly  2684 QVILATQPMYYGLETIVQNTVMSSQQFVSTAMPGMLS----QNASFSATTTQVF--QASKIEPIV 2742
            ..|:...|    .|.:||..:.:..:.:...|...|:    :|.:| .|..:.:  :..|.:|..
Zfish  1137 MAIMGHNP----CEAVVQQVLAALIEEMKNIMQRDLNRKMVENVAF-GTFDEWWDRKERKAKPFQ 1196

  Fly  2743 DLPAGYVVLNNTGDASSAGTFLNAASVLQQQTQDDTTTQILQNANFQFQSVPT-----SSGASTS 2802
            ....|..|                  |.:::.:::.||..:..:|...:.:.:     .||....
Zfish  1197 TAMRGVAV------------------VREEEKKEEKTTTTMTTSNRPREPLMSLVDWAKSGGMEG 1243

  Fly  2803 MDYTSPVMVTAKIPPVTQIKRTNAQAKAAGIS---GVGKVPPQPQVVNKVLPTSI-----VTQQS 2859
            ......:.:     |..::||...|....|..   .....||..:..:.....|.     .|::.
Zfish  1244 FSLRGALRL-----PSFKVKRKEPQELVEGDELKRARPSTPPDEEDEDSYQGKSADAAAGRTEER 1303

  Fly  2860 QVQVKNSNLKQSQVKGKA-----ASGTGTTCGAPPSIASKPLQKKTNMIRPIHKLEVKPKVM--- 2916
            :|..:.:..::|:.|.:.     :.|..|:.|:    :|:...:.::.:.     |.:.:.:   
Zfish  1304 RVAERGAARRRSRAKARKPYELDSEGEETSDGS----SSEKEDEDSDKVD-----ESEDEALSAD 1359

  Fly  2917 --------KPTPKVQNQNHSLLQQQQQQQPQLQQQIPAVVVNQVPKVTISQQRIPAQTQQQQLQQ 2973
                    ..:....:.:.|.....::.:.:.:|...:..::.:.:.|:... ....|::.:..:
Zfish  1360 SDDESVSSSSSESSSSSSASSSSSDEEDEEEGEQAAESESLDTMDESTMDSV-AAVDTEKDERDK 1423

  Fly  2974 AQM----IHIPQQQQ-------PLQQQQVQVQPSMPIITLAEAPVVQSQFVMEPQALEQQELANR 3027
            |.:    :..|:.:|       |:.......:||.||:.|   |.::.:......::|:.|:...
Zfish  1424 ASLDQPSVTTPEDKQEEEKSATPVPPSSPYPRPSSPILLL---PPLKKRRKTVSFSMEESEVKPS 1485

  Fly  3028 VQHFSTSSSSSSSNCSLPTNV---VNPMQQQAPSTTSSSTTRPTNRVLPMQQRQE---------- 3079
            ||. ||:||.|.|..|..::|   |:|:....|:..|:| ::|...:||...|..          
Zfish  1486 VQS-STASSPSPSPVSQASDVPPSVSPVSTPTPAAPSAS-SKPVPMLLPFASRPSESSALTSPAS 1548

  Fly  3080 -------PAP---LSNECPVVSSPTPPKPVEQPIIHQMTSASVSKCYAQKSTLPSPV-------- 3126
                   |.|   |..:.|..|...||.|...|     ...|..:......|.|:||        
Zfish  1549 PSAILTVPPPVRSLRPDEPKKSPGPPPSPQTPP-----PKNSTKRGKDSPRTPPAPVCLTVQNLP 1608

  Fly  3127 YEAELKVSSVLESIVP-DVTMDAILEEQP--VTESIYTEGLYEKNSPGESKTEQLLLQQQQREQL 3188
            .:....|....|..|| ..|.......:|  :::|.....|:......:...|:|    :||.:|
Zfish  1609 LDHASMVKMAYEDPVPLPTTQKGRARGRPRTLSQSASASHLHPALEEEDEDEEEL----EQRLKL 1669

  Fly  3189 NQQLVNNGYL------------LDKHTFQVEPMDTDVYREE----DLEEE---EDEDDDFSLKMA 3234
            .:||..:..|            |.....:::| :.|:..||    |..||   |:|:.||.....
Zfish  1670 REQLGVSSLLQLASAPKPDLSVLADVALKMDP-EADIDSEETETSDEAEEHKLEEEEGDFFAPHP 1733

  Fly  3235 TSACND-------HEMSDSEEPAVKDKISKILDNLTNDDCADSIATATTMEVDASA-GYQQMVED 3291
            .....|       .|.:.|:.||.:        ::|.........:...:..|.:. |.|:..|:
Zfish  1734 RQPLLDPEGLFVMQEHNYSKTPAPQ--------HITPPQKKTKQDSTVLLPADLNQHGVQEAPEE 1790

  Fly  3292 VLATTAAQSAPTEEFEGALETA--AVEAAATYINEMADAHVLDLKQ---LQNGVELELRRRKEEQ 3351
            |:....|..|...|..|.|:..  ..|||.|....::..:    |:   :...||||.|.:.:.:
Zfish  1791 VIGEALAARAEAPELYGDLDLLCDGREAAETQTKTLSSPY----KRTGSISKEVELEERGKGKNK 1851

  Fly  3352 RTVSQEQEQSKAAIVPTAAAPEPPQPIQEPKKMTGPHLLYEI---QSEDGFTYKSSSITEIWEKV 3413
            :...:::|..:   :.|:...:..| :::.||........::   |.|.|  ..|||.::..:..
Zfish  1852 KRSRKDKENEE---LQTSKKQKEKQ-VKKQKKRKLEEFEEDVDVEQLESG--ELSSSTSDSGDSD 1910

  Fly  3414 F----------EAVQVARRAH----GLTPLPEGPLADMGGIQMIGLKTNALKYLIEQLPGVEKCS 3464
            |          |.|:.:.|..    ||||..:                ...|:..|.|| :.:  
Zfish  1911 FGLERSLEFEKEEVRKSERLFLQEAGLTPSTQ----------------RRPKHTPESLP-IPR-- 1956

  Fly  3465 KYTPKYHKRNG--------NVSTAANGAHGGNLGGSSASAALSVSGGDSHGLLDYGSD------- 3514
               |.|..|:.        ::..:........|..|:....|.    |.|| .|:.:|       
Zfish  1957 ---PSYKNRSEFEQMTILYDIWNSGLDQEDMRLLKSTYEKLLQ----DDHG-TDWLNDTHWVPHT 2013

  Fly  3515 --------------QDELEENAYDCARCEPY--SNRSEYDMFSWLASRHRKQPIQV------FVQ 3557
                          ..:|.|:...|||.|.|  .:|.|.|::..|     .||:.:      ...
Zfish  2014 ITNIPNPRRKKKTADGQLREHVTGCARSEGYYAISRKEKDVYLEL-----DQPVTLREIGDYDTA 2073

  Fly  3558 PSDNELVPRRGTGSNL------PMAMKYRTLK----ETYKDYVGVFRSHIHGRGLYCTKDIEAGE 3612
            .|:..|..||.....|      |..|....||    :..|..:...||.||..||:..:.|.|.|
Zfish  2074 GSNRVLSERRSEQRRLLSAIGTPAVMDSDLLKLNQLKFRKKKLRFGRSRIHEWGLFAMEPIAADE 2138

  Fly  3613 MVIEYAGELIRSTLTDKRERYYDSRGIG-CYMFKIDDNLVVDATMRGNAARFINHCCEPNCYSKV 3676
            |||||.|:.||..:.|.||:.|...||| .|:|::|.:.::|||..||.||||||||.||||:||
Zfish  2139 MVIEYVGQSIRQMVADNREKRYAQEGIGSSYLFRVDHDTIIDATKCGNLARFINHCCTPNCYAKV 2203

  Fly  3677 VDILGHKHIIIFALRRIVQGEELTYDYKFPFEDEKIPCSCGSKRCRKYLN 3726
            :.|...|.|:|::.:.|...||:|||||||.|:.||||.||::.||..||
Zfish  2204 ITIESQKKIVIYSKQPIGVNEEITYDYKFPIEENKIPCLCGTESCRGTLN 2253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:413390
PRK13914 <1006..>1224 CDD:237555
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134
FYRN 1890..1937 CDD:461787
FYRC 3388..3476 CDD:197781 21/112 (19%)
SET_KMT2A_2B 3575..3726 CDD:380947 73/155 (47%)
setd1aXP_021329647.2 None
Blue background indicates that the domain is not in the aligned region.

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