DRSC/TRiP Functional Genomics Resources

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Protein Alignment trx and pie

DIOPT Version :10

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:NP_524740.2 Gene:pie / 44315 FlyBaseID:FBgn0005683 Length:582 Species:Drosophila melanogaster


Alignment Length:469 Identity:83/469 - (17%)
Similarity:151/469 - (32%) Gaps:130/469 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1269 CFLCGSTGLDPLIFCACCCE---PYHQYCVQDEYNLKHGSFEDTTLMGSLLETTVNASTGPSSSL 1330
            |.:|..:..|.|:|......   ..|.:|:....:|.....:.:.::|.||......:.....  
  Fly     9 CLICKYSDTDDLVFGEWMIVRNLQVHYFCLLLSTHLPQRGGDSSGILGFLLRDIREEAAAAEK-- 71

  Fly  1331 NQLTQRLNWLCPRCTVCYTCNMSSGSKVKCQKCQKNYHSTCLGTSKRLLGADRPLICVNCLKCKS 1395
                          ..|:.|| ..|:.::|.:|:..:|..|        |.:...:...|.:.||
  Fly    72 --------------RKCWYCN-KIGASLQCDRCRSLFHLKC--------GLENRAVFEFCGQYKS 113

  Fly  1396 CSTTKVSKFVGNLPMCTGCFKLRKKGNF-------------CPIC-QRCYDDNDFDLKMMECGDC 1446
            .                 |:|.|...::             |||| ...|   ..:|..:..|||
  Fly   114 Y-----------------CYKCRPMDDYKRQLQSNPPRNATCPICFSSIY---KVELHCVVYGDC 158

  Fly  1447 GQ--WVHSKCEGLSDEQYNLLSTLPESIEFICKKCARRNESSKIKA----------EEWRQAVME 1499
            .:  :.|.||.    .||.|.|..  .:..|..:..|..:|.::::          |:.|.|..|
  Fly   159 CRLGFAHKKCM----RQYALTSGY--YLRCIWCRSERFRDSIRLQSVFVPDRDATWEKQRNAYRE 217

  Fly  1500 EFKASL--------------YSVLKLLSKSRQACALLKLSPRKKLRCTCGASSNQGKLQPKALQF 1550
            ..:.:|              |:.|..:.....:||    :....|:|..||.....|.:....:.
  Fly   218 LHERNLKCDQPNCLCPSGRTYNRLSWVILCCSSCA----ATSAHLKCLVGALRLPKKRERTDFKC 278

  Fly  1551 S---------------------SGSDN---------GLGSDGESQNSDDVYEFKDQQQQQQQRNA 1585
            |                     :..||         .||.|..:::......|.::.:.::..|.
  Fly   279 SMCLDVERRIAEGPARTTEETNADGDNQVDGSFYVQKLGPDAATRSLTQTPVFSEEDESERSSNI 343

  Fly  1586 NMNKPRVKSLPCSCQQHISHSQSFSLVDIKQKIAGNSYVSLAEFNYDMSQVIQQSNCDE-LDIAY 1649
            .:...:.||...|.:..:|..|...:|:|......:...|:.| |:....:.::...|. ..||.
  Fly   344 TVIFSQPKSNATSERLSLSPPQEEMIVEIPDSPEASPKTSIDE-NHSPQPIARRDTSDSPQPIAA 407

  Fly  1650 KELLSEQFPWFQNE 1663
            .|:.....|...:|
  Fly   408 SEIPDSPQPTAASE 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:413390
PRK13914 <1006..>1224 CDD:237555
PHD1_KMT2A_like 1268..1344 CDD:276981 11/77 (14%)
PHD 1346..1390 CDD:214584 9/43 (21%)
PHD3_KMT2A_like 1423..1479 CDD:276983 17/71 (24%)
ePHD_KMT2A_like 1737..1841 CDD:277134
FYRN 1890..1937 CDD:461787
FYRC 3388..3476 CDD:197781
SET_KMT2A_2B 3575..3726 CDD:380947
pieNP_524740.2 PHD_SF 9..117 CDD:473978 24/149 (16%)
PHD_SF 224..>260 CDD:473978 5/39 (13%)
PRK10263 <265..>493 CDD:236669 25/158 (16%)
Blue background indicates that the domain is not in the aligned region.

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