DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trx and CG5098

DIOPT Version :10

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:NP_001261066.1 Gene:CG5098 / 37063 FlyBaseID:FBgn0034300 Length:1339 Species:Drosophila melanogaster


Alignment Length:1380 Identity:288/1380 - (20%)
Similarity:424/1380 - (30%) Gaps:458/1380 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  2411 PAQPQLIAVSTNPDGTQQFIQIPQTMQATTT--------PTATYQTLQAT--NTD-----KKIML 2460
            |.||||..:|....|   .::.|.....:.|        |.|.|..:.|.  |.|     ..::.
  Fly    31 PRQPQLAHMSNERPG---MVRSPLAWHVSGTVSAQPPPPPDAIYNFMSANHKNLDHHHQMNPLLA 92

  Fly  2461 PLTAAGKPLKTV-----ATKAAQQAAVKQRQLKSGHQVKPIQAKLQPHPQQHQQQQQTQVQQPIT 2520
            |..:...|..::     :.::|.|...||         .|.|   |||  |.|||||:.:..|..
  Fly    93 PPYSGTLPFNSMDLSLQSARSAAQPLAKQ---------PPNQ---QPH--QTQQQQQSLIHAPNY 143

  Fly  2521 VMGQNL----------LQPQLLFQSSTQTQAPQIILPQAQPQNIISFVTGDGSQGQPLQYISIPT 2575
            ...|||          ||.|...:......|..:.|.|:..||          ||.|...:|  .
  Fly   144 PSIQNLTTNATPTSTQLQQQQQQEHLAAMAAAHVSLLQSSRQN----------QGAPSGNLS--N 196

  Fly  2576 AGEYK---PQPQPTATP-----TFLTTAPGAGAT-------YLQTDASGNLVLTTT--------- 2616
            .|:.:   |.|.||:..     |...::..:|:.       |:|: ...|..||..         
  Fly   197 GGDCESLLPPPPPTSVSGNTNHTGSNSSSNSGSNNHIASPHYMQS-RDENFKLTQLKRSFEPDLS 260

  Fly  2617 ------------PSNSGLQMLTAQSLQAQ-----PQVIGTLIQPQTIQLGGGADGNQPGSNQQPL 2664
                        ||.|....|...::|.|     |..:....|.|           ||..|..|.
  Fly   261 GKNPQKEKDFGYPSASSASKLPTHNVQQQHANKKPSPLRNYHQQQ-----------QPPYNLTPK 314

  Fly  2665 ILGGTGGGSSGLEFATTSPQVILATQPMYYGLETIVQNTV----------------MSSQQFVST 2713
            ..|..         ...:||..||..|......|:..|.:                |...|..|.
  Fly   315 YNGPQ---------TPPTPQSPLAANPHQMLSPTMDYNQLHLHHQLNSSSGGSYQHMQQDQTQSQ 370

  Fly  2714 AMPGML---SQNASFSATTTQVFQASKIEPIVDLPAGYVVLNNTGDASSAGTFLNAASVLQQQTQ 2775
            :.|..|   :|:|     |:|......:.|:  |.:|.... ...|||...|    ||..|.||.
  Fly   371 SHPQHLHYHNQHA-----TSQTAPPPLLPPL--LTSGQFHA-QPQDASQQQT----ASSSQHQTH 423

  Fly  2776 DDTTTQILQNANFQFQSVPTSSGASTSMDYTSPVMVTAKIPPVTQIKRTNAQAKAAGISGVGKVP 2840
            ...|.| |.|.:...:..|.|.                :.|.:|.:...|::......:.|.:.|
  Fly   424 HSRTAQ-LTNLDQAVKHKPESE----------------EQPVITDLSYRNSETDKTAANPVPEAP 471

  Fly  2841 PQPQVVNKVLPTSIVTQQSQVQVKNSNLKQSQVKGKAASGTGTTC--GAPPSIASKPL--QKKTN 2901
            ..|     .|.||  .::|.....||:..:.:.|.||:.....|.  .||....|||.  |:..|
  Fly   472 ESP-----YLTTS--NEESLESNSNSSNSRKRRKRKASMVMRVTPNENAPEGENSKPQHPQQAAN 529

  Fly  2902 MIRPIHKLEVKPKVMKPTPKVQNQNHSLLQQQQQQQPQLQQQ-----IPAVVV------------ 2949
            :     .....||........:.|..|..:|.|.:..:..|:     .||...            
  Fly   530 L-----NNSCSPKKSPKNGGGEFQPFSTQKQSQTENEKTTQENGRGGSPAPAENNSNSNSSTLYN 589

  Fly  2950 -NQVPKVTISQQRIPAQTQQQQLQQAQMIHIPQQQQPLQQQQVQVQPSMPIITLAEAPVVQSQFV 3013
             |:.||         .:.|:|.|.|..:....:.||..:..:....|:||      .|..||.  
  Fly   590 DNENPK---------TKKQRQALLQRNLTEQHRMQQDDEPPKNHTSPAMP------PPSPQSN-- 637

  Fly  3014 MEPQALEQQELANRVQHFSTSSSSSSSNCSLPTNVVNPMQQQAPSTTSSSTTRPTNRVLPMQQRQ 3078
                              |:|||||||:.               :|.||.::...|.:       
  Fly   638 ------------------SSSSSSSSSSA---------------NTHSSQSSHAVNNI------- 662

  Fly  3079 EPAPLSNECPVVSSPTPPKPVEQPIIHQMTSASVSKCYAQKSTLPSPVYEAELKVSSVLESIVPD 3143
             |.|..|......:|..|..|||..|....:.||.:|..::....:.|..|.           ||
  Fly   663 -PKPEINNKATTDTPASPALVEQGDIDAKPAVSVHECDEEEEPAVNKVSPAH-----------PD 715

  Fly  3144 VTMDAILEEQPVTESIYTEGLYEKNSPGESKTEQLLLQQQQREQLNQQLVNNGYLLDKHTFQVEP 3208
            ....|.:...|.|||      .:|:||.                .|.:....|.:.||    :|.
  Fly   716 PPTTAAVAAPPATES------PKKSSPA----------------ANSESCPFGEVEDK----LEQ 754

  Fly  3209 MDTDVYREEDLEEEEDEDDDFSLKMATSACNDHEMSDSEEPAVKDKISKILDNLTNDDCADSIAT 3273
            |...:       |||.|                .:|..|:|| ::..:.:..|||.....|...|
  Fly   755 MFAGI-------EEETE----------------RISSPEKPA-EESAAMVAHNLTAQLALDPSKT 795

  Fly  3274 ATTMEVDASAGYQQMVEDVLATTAAQSAPTEEFEGALETAAVEAAATYINEMADAHVLDLKQLQN 3338
                 :|..|..|   ..|||..|....||.|.......||:::.                 :.:
  Fly   796 -----LDTPAENQ---TSVLAVLAPNQTPTPEIRPVATKAAMKST-----------------MPS 835

  Fly  3339 GVELEL-RRRKEEQRTVSQEQEQSKAAIVPTAAAPEPPQP---------------IQEP------ 3381
            .|...: :.|......|:.:..:|...:...|.||..|.|               |.:|      
  Fly   836 PVHSPIPQSRSTSTPLVAGDDSKSNTPVPAKAPAPRRPPPRRLSMGMDASLLRFMIDDPPAKKPG 900

  Fly  3382 --KKMTGPHLLYEIQSEDGFTYKSSSITEIWEKVFEAVQVARRAHGLTPLP-EGPLADMGGIQMI 3443
              ||:|     .|...||.....:|:..   .....|.|::..|......| .|......|::  
  Fly   901 RKKKVT-----KEPDFEDDDKPSTSAAA---AAALAARQLSEAASATKSKPAAGAKKKNAGVK-- 955

  Fly  3444 GLKTNALKYLIEQLPGVEKCSKYTPKYHKRNGNVSTAANGAHGGNLGGSSASAAL---------- 3498
            |.|.:|.|       |..|.:|...|...|....:|..:.......||.|.....          
  Fly   956 GKKGSAGK-------GNAKNAKQNGKKSARKPAFTTDEDSTPAPTNGGGSVPELRFKSPFILIKP 1013

  Fly  3499 --SVSGGDSHGLLDYGSDQDELEE-----------------NAYD---------CARCE------ 3529
              |||..::|...|....|.::::                 |.||         |..|:      
  Fly  1014 DGSVSIKNTHSAEDVNEKQTKVKKAPHERKNLRGMHSSTLSNRYDADTTDSTWICVFCKRGPHKL 1078

  Fly  3530 -------PYSNRSEYDMFSWLASRHRKQPIQ-VFVQPSDNE-LVPRRGTGSNLP----------- 3574
                   ||...|:.|.:.........|.|. :||.....| :|  :|...|||           
  Fly  1079 GLGDLFGPYLVTSDCDEYRAAVQTPGAQDIDGMFVNKRRREDMV--KGQERNLPAVPATLANIMQ 1141

  Fly  3575 ---MAMKYRTLKETY 3586
               ::|..|..|:|:
  Fly  1142 APKISMHKRKRKQTH 1156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:413390
PRK13914 <1006..>1224 CDD:237555
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134
FYRN 1890..1937 CDD:461787
FYRC 3388..3476 CDD:197781 19/88 (22%)
SET_KMT2A_2B 3575..3726 CDD:380947 4/12 (33%)
CG5098NP_001261066.1 PHD_SF 1068..1284 CDD:473978 20/91 (22%)
Blue background indicates that the domain is not in the aligned region.

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