DRSC/TRiP Functional Genomics Resources

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Protein Alignment trx and Suv39h2

DIOPT Version :10

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:XP_038951911.1 Gene:Suv39h2 / 364785 RGDID:1306969 Length:511 Species:Rattus norvegicus


Alignment Length:199 Identity:64/199 - (32%)
Similarity:98/199 - (49%) Gaps:30/199 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  3553 QVFVQPSD--NELVPRRGTGSNLPMAMKYRTLKETYKDYVGVFR-SHIHGRGLYCTKDIEAGEMV 3614
            |:.:||..  .|...|...|.:.|    .|.:::..:..:.:|| |:..|.|:.....|:....|
  Rat   318 QIKIQPGTPIYECNSRCRCGPDCP----NRIVQKGTQYSLCIFRTSNGCGWGVKTLVKIKRMSFV 378

  Fly  3615 IEYAGELIRSTLTDKRERYYDSRGIGCYMFKID---DNLVVDATMRGNAARFINHCCEPN--CYS 3674
            :||.||:|.|...::|.:.||::|| .|:|.:|   |...|||...||.:.|:||.|:||  .:|
  Rat   379 MEYVGEVITSEEAERRGQLYDNKGI-TYLFDLDYESDEFTVDAARYGNVSHFVNHSCDPNLQVFS 442

  Fly  3675 KVVDILGHK--HIIIFALRRIVQGEELTYDYKFPFEDE---------------KIPCSCGSKRCR 3722
            ..:|.|..:  .|.:|:.|.|..|||||:||:.....|               :..|.||::.||
  Rat   443 VFIDNLDTRLPRIALFSTRTIKAGEELTFDYQMKGSGELSSDSIDYSPARKRVRTQCKCGAETCR 507

  Fly  3723 KYLN 3726
            .|||
  Rat   508 GYLN 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:413390
PRK13914 <1006..>1224 CDD:237555
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134
FYRN 1890..1937 CDD:461787
FYRC 3388..3476 CDD:197781
SET_KMT2A_2B 3575..3726 CDD:380947 55/173 (32%)
Suv39h2XP_038951911.1 CD_SUV39H1_like 148..196 CDD:349289
SET_SUV39H2 268..510 CDD:380930 61/196 (31%)
Blue background indicates that the domain is not in the aligned region.

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