DRSC/TRiP Functional Genomics Resources

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Protein Alignment trx and set-25

DIOPT Version :10

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:NP_499738.3 Gene:set-25 / 3565129 WormBaseID:WBGene00012802 Length:714 Species:Caenorhabditis elegans


Alignment Length:815 Identity:157/815 - (19%)
Similarity:265/815 - (32%) Gaps:295/815 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  3020 EQQELANRVQHFSTSSSSSSSNCSLPTNVVNPMQ---------QQAPSTTSSSTTRPTNRVLPMQ 3075
            |.|.|..|.:..:|.::.||..    .||:...:         |.||||::.....|..     .
 Worm    75 ETQRLRQRRRISATDATQSSRT----MNVIEDRKPRVNRARKSQDAPSTSTCGFETPVG-----T 130

  Fly  3076 QRQEPAPLSNECPVVSSPTPPKPVEQPIIHQMTSASVSKCY------AQKSTLPSPVYEAELKVS 3134
            :|:..|        ..|..|||   |..:.::..||.||..      .:|:|.|: |.::..:.|
 Worm   131 KRKSKA--------ADSQKPPK---QSKLRKIDEASTSKAVDNSSKDGKKTTKPA-VTQSNRRRS 183

  Fly  3135 SVLESIVPDVTMDAILEEQPVTESIYTEGLYEKNSPGESKTE-QLLLQQQQREQLNQQLVNNGYL 3198
            .:....||             .|:|::|     :|..||.|| :..:..|||.   :::..|..:
 Worm   184 GLSLRPVP-------------IETIFSE-----SSGRESSTEDEADVSHQQRV---EKIAKNPIM 227

  Fly  3199 LDKHTFQVEPMDTDVYREEDLEEEEDEDDDFSLKMATSACNDHEMSDSEE---------PAVKDK 3254
            :     .|.|:....|..   .|.......:..:: ...||:...:....         |.:..|
 Worm   228 V-----VVLPLGPGNYPN---NERITVVSTYKSRV-NKNCNEARRAQRHGSWSRKGIAFPGIPTK 283

  Fly  3255 ISKILDNLTNDDCADSIATATTMEVDASAGYQQMVEDVL---------------ATTAAQSAPT- 3303
                  ..|..|.|...|.|:..  .|.|.::.....:|               ....|::||| 
 Worm   284 ------KFTKSDLAKYGAHASNW--PAQAAFRSEEGKILIYYEGWTCLTLHRLSVEECARTAPTI 340

  Fly  3304 -------EEFEGALETAAVEAAATYINEMADAHVLDLKQLQNGVELELRRRKEEQRTVSQEQEQS 3361
                   ::|...:::||.|.|...:.          |..:||:||.|             .|..
 Worm   341 LEEMSIRDKFIETVKSAAAEEAKLVVE----------KNQENGIELTL-------------DEAL 382

  Fly  3362 KAAIVPTAAAPEPPQPIQEPKKMTGPHLLYEIQSEDGFTYKSSSITEIWEKVFEAVQVARRAHGL 3426
            |...:             ||...:.|..::.|..:..:.:...:                |..||
 Worm   383 KQIFI-------------EPVPQSSPENVFWIYQDLSYFHTMDN----------------RDLGL 418

  Fly  3427 TPLPEGPLADMGGIQMIGLKTNALKYLIEQLPGVEKCSKYTP------KYHKRNGNVSTAANGAH 3485
            .|           :..|...|.:::         ..|..||.      ..:||  .:.:.||   
 Worm   419 AP-----------VFYISSYTQSVR---------PPCYAYTAINIVDVDAYKR--CLESRAN--- 458

  Fly  3486 GGNLGGSSASAALSVSGGDSHGLLDYGSDQDELEENAYDCARCEPYSNRSEYDMFSWLASRHRKQ 3550
                          :|..|..|...:...:.:..||...| :|:.        .|.:|...|...
 Worm   459 --------------MSFADLTGQKIWMPTRSKACENGTKC-KCDA--------RFMFLYDPHDVT 500

  Fly  3551 PIQVFVQPS----------DNELV--------------PRRG--TGSNLPMAMKYRTLKETYKDY 3589
            .::  ..|.          ||..:              |||.  .|...|:|:.|...::     
 Worm   501 NLE--CTPDGKVDFTDFKIDNARIVMECSDACGCSLDCPRRSLQRGQQHPLAVYYEGPEK----- 558

  Fly  3590 VGVFRSHIHGRGLYCTKDIEAGEMVIEYAGELI----------RSTLTDKRERY----------- 3633
                     |.|:....:|:|||:|.||.|::.          .||.||..|..           
 Worm   559 ---------GFGVRAAANIKAGELVCEYTGDVTLLPTSDPVASSSTKTDDGEEQENPEAPERVDS 614

  Fly  3634 -YDSRGIGCYMFKIDDNLVVDATMRGNAARFINHCCEPNCYSKVVDILGHK--------HIIIFA 3689
             ||:.     ...:|..:::.|...||.:|||||.|:|:  |..|::...:        .:.::|
 Worm   615 SYDAA-----FNAMDTKIIISAKKTGNISRFINHSCDPS--SVFVEVYSRRFEEDPLIPRVAVYA 672

  Fly  3690 LRRIVQGEELTYDYKFP---FEDEKIPCSCGSKRC 3721
            ::.|..|||:|..|..|   ::...:.|.|.|.:|
 Worm   673 IKDIALGEEITIAYYEPGIEWKRSSVKCRCKSTKC 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:413390
PRK13914 <1006..>1224 CDD:237555
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134
FYRN 1890..1937 CDD:461787
FYRC 3388..3476 CDD:197781 12/93 (13%)
SET_KMT2A_2B 3575..3726 CDD:380947 44/180 (24%)
set-25NP_499738.3 SET <525..711 CDD:394802 49/204 (24%)
Blue background indicates that the domain is not in the aligned region.

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