DRSC/TRiP Functional Genomics Resources

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Protein Alignment trx and Phf7

DIOPT Version :10

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:NP_608374.1 Gene:Phf7 / 33015 FlyBaseID:FBgn0031091 Length:520 Species:Drosophila melanogaster


Alignment Length:557 Identity:107/557 - (19%)
Similarity:172/557 - (30%) Gaps:163/557 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1735 RMCLFCRKSGEGLSGEEARLLY----CGHDCWVHTNCAMWSAEVFEEIDGSL-------QNVHSA 1788
            ::|:.|      ||||...|::    ...:..||.||...|:.:.:..:..|       :::.:.
  Fly     3 QICVLC------LSGERDELIFGTVHVEGNMMVHRNCLYLSSNLIQRGEKKLSIMNFLKEDIEAE 61

  Fly  1789 VARGRMIKCTVCGNRGATVGCNVRSCGEHYHYPCARSID----CAFLTDKSMYCPAHA------- 1842
            |.|.|::||..|...||.:.|....|...:|..|  .:|    ..|....:.:|..|.       
  Fly    62 VNRCRLLKCCYCRRLGANIWCCKSGCRRTFHTKC--GVDNLAQNQFCDTYNSFCHQHVLVPRNRP 124

  Fly  1843 --KNGNALKANGSPSVTYESNFEVSRPVYVELDRKRKKLIEPARVQFHIGSLE------------ 1893
              ||...........|.....|.|...:|....|..         .||...|:            
  Fly   125 VFKNDEECLLCAEDVVAKGERFSVVTCLYAPCCRNG---------WFHRRCLQRYANSSGYFFKC 180

  Fly  1894 -----------VRQLGAIV-----------PRFSDSYEAVVPIN-FLCSRLYWSSKEPWKIVEYT 1935
                       |..:|..|           ..|:..|...|... .||..:  |.:.....:...
  Fly   181 PLCNNTDVFRRVAYMGIAVLDQDASWETEPDAFAGQYRRDVNCTAALCVAV--SGRADTSAMLLY 243

  Fly  1936 VRTTIQNSSSTLTALDVGRNYTVDHTNPNSKEVQLGMAQIARWHTSLARSEFLENGGTDWSGEFP 2000
            ..:...|.|..|..|...:||.....:..|.|.           ..:|.|:..:.|..|.|.|.|
  Fly   244 CTSCGANPSHYLCTLKTLQNYVCKVCSAVSPEA-----------VPVAESDSDDAGSMDDSAEAP 297

  Fly  2001 NPNSCVPPDENTEEEPQQQADLLPPELKDAIFEDLPHELLDGISMLDIFLYDDKTDLFAISEQSK 2065
            .|.             ....|.:..:|..:.::|.      |.|       ||.    |:.:::.
  Fly   298 RPG-------------HLNGDQIQEKLSPSHWDDF------GSS-------DDD----AVFQRAF 332

  Fly  2066 DGTQAMTSNQAQNQNQQAGGANSVSICDEDTRNSNTSLGNGWPASNPVEDAMLSAARNSSQVQML 2130
            | |:..:.....:.:|.:..|.:.::.|..||...         |...:...||:...|.:    
  Fly   333 D-TKVQSRVVTLSDDQPSTSAGARALADRGTRTFE---------SQGTQTTFLSSVVTSFR---- 383

  Fly  2131 KTLAWPKLDGNSAMATAIKRRKLSKNLAEGVFLTLSSQQRNKKEMATVAG--------VSRRQSI 2187
                       ||.|||......|.:.:..   ||.:|:..  |.:|..|        ||..:.:
  Fly   384 -----------SATATATSSTSTSTSTSAS---TLDNQENT--EPSTSNGRRPWRPRYVSPPRHV 432

  Fly  2188 SETSVEGVATTSGSVRSK--SFTWSAAKRYFEKSEGR 2222
            |::..:.....|....||  ..|.:||    ..|.||
  Fly   433 SDSDDDSDEYDSDEYESKRRQLTPTAA----APSNGR 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:413390
PRK13914 <1006..>1224 CDD:237555
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134 28/118 (24%)
FYRN 1890..1937 CDD:461787 10/81 (12%)
FYRC 3388..3476 CDD:197781
SET_KMT2A_2B 3575..3726 CDD:380947
Phf7NP_608374.1 ePHD_PHF7_G2E3_like 5..116 CDD:277139 28/118 (24%)
RING_Ubox 129..183 CDD:473075 8/62 (13%)
Blue background indicates that the domain is not in the aligned region.

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