DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trx and Set2

DIOPT Version :9

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster


Alignment Length:2035 Identity:381/2035 - (18%)
Similarity:653/2035 - (32%) Gaps:738/2035 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1841 HAKNG-----------NALKANGSPSVTYE---SNFEVSR---------PVYVEL---DRKRKKL 1879
            |:::|           .|..|:.|.:.|..   |.||:|.         |..:|:   .|..:.|
  Fly   104 HSQSGTTAASTSMSTATASAASASSAATVSRLFSMFEMSHQSLPPPPPPPTALEIFAKPRPTQSL 168

  Fly  1880 I------EPARVQFHIGSLEVRQLGAIVP------------RFSDSYEAVVPINFL--CSRLYWS 1924
            |      ||:.|.   |:..|:.:..:.|            :.:|:  |::|...:  ||....:
  Fly   169 IVAQVTSEPSAVG---GAHPVQTMAGLPPVTPRKRGRPRKSQLADA--AIIPTVIVPSCSDSDTN 228

  Fly  1925 SKEPWKIVEYTVRTTIQNSSSTLTALDVGRNYTVDHTNPNSKEVQLGMAQIARWHTSLARSEFLE 1989
            |          ..||..|.||     |.|.........|.||           ...||.|   |:
  Fly   229 S----------TSTTTSNMSS-----DSGELPGFPIQKPKSK-----------LRVSLKR---LK 264

  Fly  1990 NGG---TDWSGEFPNPNS--CVPP---DENT-EEEPQQQADLLPPELKDAIFEDLPHELLDGISM 2045
            .||   :..||..|:.:|  ..||   |||. :|.|:|:.:|  ..:.||      .|..|..|.
  Fly   265 LGGRLESSDSGNSPSSSSPEVEPPALQDENAMDERPKQEQNL--SRMVDA------EENSDSDSQ 321

  Fly  2046 LDIFLYDDKTDLFAISEQSKDGTQAMTSNQAQNQNQQAGGANSVSICDEDTRNSNTSLGNGWPAS 2110
            : ||:        .|..:|..|          .:.|:.|  ..|.:..:|..:.:..|....|..
  Fly   322 I-IFI--------EIETESPKG----------EEEQEEG--RPVEVEPQDLIDIDMELAKQEPTP 365

  Fly  2111 NPVEDAMLSAARNSSQVQMLK--TLAWPKLDGNSAMATAIKRRKLSKNLAEGVFLTLSSQQRNKK 2173
            :|.||.      :...|::|.  ...|...|.......|..:|..... .|....:.||..|..:
  Fly   366 DPEEDL------DEIMVEVLSGPPSLWSADDEAEEEEDATVQRATPPG-KEPAADSCSSAPRRSR 423

  Fly  2174 EMATVAGVSRR-QSISETSVEGVATTSGSVRSKSFTWSAAKRYFEKSEGREEAAKMRIMQMDGVD 2237
            ..|.::|.||: :::.||..|..|.:|..:...           |:|:.:||    :.:.:|.::
  Fly   424 RSAPLSGSSRQGKTLEETFAEIAAESSKQILEA-----------EESQDQEE----QHILIDLIE 473

  Fly  2238 DSITEFRIISGDGNLSTAQFSGQVKCDRCQCTYRNYDAFQRHLPSCSPTMSSNETESDVSGQG-M 2301
            |:::|..:.|                                  |.|||:.....|..|..:. :
  Fly   474 DTLSESEVTS----------------------------------SVSPTIEHMVVEEVVVEENQL 504

  Fly  2302 TNNATQISAESLNELQKQLLANAGGLNYLQSATSF-PQVQSLGSLGQFGLQGLQQLQLQPQSLGS 2365
            .:.|.:|.......:.|::.:.:..:....:...| |:|::..:.|:.                 
  Fly   505 VDEADEILDSKQEFVIKKVFSESDNIAASLNKDIFEPKVETKATCGEV----------------- 552

  Fly  2366 GFFLSQPNPATQANTDDLQIYANSLQSLAANLGGGFTLAQPTVTAPAQPQLIAVSTNPDGTQQFI 2430
                 .|.|  :..|:|:.|    .:.:||.|.....:.:||....|:.:|              
  Fly   553 -----VPRP--EMVTEDVYI----TEGIAATLEKSAVVTKPTTEMIAETKL-------------- 592

  Fly  2431 QIPQTMQATTTPTATYQTLQATNTDKKIMLPLTAAGKPLKTVATKAAQQAAVKQRQLKSGHQVKP 2495
                                   :|:.::.|      |||                         
  Fly   593 -----------------------SDEVVIEP------PLK------------------------- 603

  Fly  2496 IQAKLQPHPQQHQQQQQTQVQQPITVMGQNLLQPQLLFQSSTQTQAPQIILPQAQPQNIISFVTG 2560
                      .....:||:|:.|.:....|:.:.:.:..:..:|.:..::.|:.        .|.
  Fly   604 ----------DESDPKQTEVELPESKPAVNIPKSERILSAEVETTSSPLVPPEC--------CTL 650

  Fly  2561 DGSQGQPLQYISIPTAGEYKPQPQPTATPTFLTTA----PGAGATYLQTDASG-----NLVLTTT 2616
            :...|..|...|:.|  |.|.......||.....|    |.|..   :.:||.     |.:|...
  Fly   651 ESVSGPVLLETSLST--EEKSNENVETTPLKTEAAKEDSPPAAP---EEEASNSSEEPNFLLEDY 710

  Fly  2617 PSNSGLQMLTAQSLQAQPQVIGTLIQPQTIQLGGGADGNQPGSNQQPLILGGTGGGSSGLEFATT 2681
            .||        |...|:.:::..              .||.|..|.||                 
  Fly   711 ESN--------QEQVAEDEMMKC--------------NNQKGQKQTPL----------------- 736

  Fly  2682 SPQVILATQPMYYGLETI------VQNTVMSSQQFVSTAMPGMLSQNASFSATTTQVFQASK--- 2737
             |::....:|:   .||:      ::|...||        |.::.:.........:|.:::|   
  Fly   737 -PEMKEPEKPV---AETVSKKEKAMENPARSS--------PAIVDKKVRAGEMEKKVVKSTKGTV 789

  Fly  2738 IEPIVDLPAGYVVLNNTGDASSAGTFLNAASVLQQQTQDDTTTQILQNANFQFQSVPTSSGASTS 2802
            .|..:|.......:.......|..:...|  :|:::|:.:.                    :|..
  Fly   790 PEKKMDSKKSCAAVTPAKQKESGKSAKEA--ILKKETEKEK--------------------SSAK 832

  Fly  2803 MDYTSPVMVTAK-------IPPVTQIKRTNAQAKAAGISGVGKVPPQ---PQVVNKVLPTSIVTQ 2857
            :|.:||..:..|       .|.:..:.:::.:            |||   |.|::|........:
  Fly   833 LDSSSPNTLDKKGKDTAQWSPQLQTLPKSSTK------------PPQESAPSVISKTTSNQPAPK 885

  Fly  2858 QSQVQVK-----NSNLKQSQVKGKAASGTGTTCGA---PPSIASKPL---QKKTNMIRPI-HKLE 2910
            :.|...|     ||.....:.|.||.||. ..|.|   ...:|:..|   :|....::.: .|:|
  Fly   886 EEQHAAKKGLSDNSPPSVLKAKEKAVSGF-VECDAMFKAMDLANAQLRLDEKNKKKLKKVPTKVE 949

  Fly  2911 VKPKVMKPTP-KVQNQNHSLLQQQQQQQPQLQQQIPAVVVNQVPKVTISQQRIPAQTQQQQLQQA 2974
            ..|||..||. .|..|..||..:...::..:.:..|.:..|..|    |.....|.|...:|:.:
  Fly   950 APPKVEPPTAVPVPGQKKSLSGKTSLRRNTVYEDSPNLERNSSP----SSDSAQANTSAGKLKPS 1010

  Fly  2975 QMIHIPQQQQPLQQQQVQVQPSMPIITLAEAPVVQSQFVMEPQALEQQELANRVQHFSTSSSSSS 3039
            ::             :.::.|...  |:.||                           .....||
  Fly  1011 KV-------------KKKINPRRS--TICEA---------------------------AKDLRSS 1033

  Fly  3040 SNCSLPTNVVNPMQQQAPSTTSSS-------TTRPTNRVLPMQQRQEPAPLSNECPVVSSPTPPK 3097
            |:.|.||..|......:.|:.|||       ||...:....:.||:        ..:.....|..
  Fly  1034 SSSSTPTREVAASSPVSTSSDSSSKRNGSKRTTSDLDGGSKLDQRR--------YTICEDRQPET 1090

  Fly  3098 PVEQPI------IHQMTSASVSKCYAQKSTLPSPVYEAELKVSSVLESIVPDVTMDAILEEQPVT 3156
            .:..|:      :|...||             :|::                   |.:|:     
  Fly  1091 AIPVPLTKRRFSMHPKASA-------------NPLH-------------------DTLLQ----- 1118

  Fly  3157 ESIYTEGLYEKNSPGESKTEQLLLQQQQREQLNQQLVNNGYLLDKHTFQVEPMDTDVYREEDLEE 3221
                |.|  :|....|.|           |.|::|               ..:|:.         
  Fly  1119 ----TAG--KKRGRKEGK-----------ESLSRQ---------------NSLDSS--------- 1142

  Fly  3222 EEDEDDDFSLKMATSACNDHEMSDSEEPAVKDKISKILDNLTNDDCADSIATATTMEVDA----S 3282
                                  |.:.:.|.|.|..|          :..|.:|..:|.::    |
  Fly  1143 ----------------------SSASQGAPKKKALK----------SAEILSAALLETESSESTS 1175

  Fly  3283 AGYQQMVEDVLATTAAQSAPTEEFEGALETAAVEAAATYINEMADAHVLDLKQLQNGVELELRRR 3347
            :|.:....||      |::|  |.|.|             |...|.    .|.:::||.| |:|.
  Fly  1176 SGSKMSRWDV------QTSP--ELEAA-------------NPFGDI----AKFIEDGVNL-LKRD 1214

  Fly  3348 K--EEQRTVSQEQEQSKA-----------AIVPTAAAPEPPQPIQEPKKMTGPHLLYEIQSEDGF 3399
            |  |:||...|::.:.:|           |.:.|.|....|.|.|.             ..||  
  Fly  1215 KVDEDQRKEGQDEVKREADPEEDEFAQRVANMETPATTPTPSPTQS-------------NPED-- 1264

  Fly  3400 TYKSSSITEIWEKVFEAVQVARRAHGLTPLPEGPLADMG-GIQMIGLKTNALKYLIEQLPGVEKC 3463
               |:|.|.:. |..|.....||:|.:...|:||.|..| |:..:.|...::...:.:|..:|  
  Fly  1265 ---SASTTTVL-KELETGGGVRRSHRIKQKPQGPRASQGRGVASVALAPISMDEQLAELANIE-- 1323

  Fly  3464 SKYTPKYHKRNGNVSTAANGAHGGNLGGSSASAALSVSGGDSHGLLDYGSDQDELEENAYDCARC 3528
                                             |::.....|.||..:    ..|:||.|.|||.
  Fly  1324 ---------------------------------AINEQFLRSEGLNTF----QLLKENFYRCARQ 1351

  Fly  3529 EPYSN-RSEYDMFSWLASRHRKQPIQVFVQPSDNELVPRRGTGSNL----------PMAMK-YRT 3581
            ....| ..:.|.|                ...|.|.......|:..          |:... .|.
  Fly  1352 VSQENAEMQCDCF----------------LTGDEEAQGHLSCGAGCINRMLMIECGPLCSNGARC 1400

  Fly  3582 LKETYKDY----VGVFRSHIHGRGLYCTKDIEAGEMVIEYAGELIRSTLTDKRERYYD-SRGIGC 3641
            ..:.::.:    ..|||:...|.|:.....|..||.::||.||:|.|...::|:..|. .|....
  Fly  1401 TNKRFQQHQCWPCRVFRTEKKGCGITAELLIPPGEFIMEYVGEVIDSEEFERRQHLYSKDRNRHY 1465

  Fly  3642 YMFKIDDNLVVDATMRGNAARFINHCCEPNCYSKVVDILGHKHIIIFALRRIVQGEELTYDYKF- 3705
            |...:....|:|||.:||.:|:|||.|:||..::...:.|...|..|:::.|..|||:|:||:: 
  Fly  1466 YFMALRGEAVIDATSKGNISRYINHSCDPNAETQKWTVNGELRIGFFSVKPIQPGEEITFDYQYL 1530

  Fly  3706 PFEDEKIPCSCGSKRCRKYL 3725
            .:..:...|.|.:..||.::
  Fly  1531 RYGRDAQRCYCEAANCRGWI 1550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:295381
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134 381/2035 (19%)
FYRN 1891..1935 CDD:283589 8/57 (14%)
FYRC 3388..3476 CDD:197781 19/88 (22%)
SET 3590..3710 CDD:214614 41/121 (34%)
Set2NP_572888.2 AWS 1358..1410 CDD:197795 7/67 (10%)
SET 1414..1533 CDD:214614 41/118 (35%)
PostSET 1535..1551 CDD:214703 4/16 (25%)
WW 2014..2043 CDD:278809
SRI 2270..2348 CDD:285448
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467631
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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