DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trx and G9a

DIOPT Version :9

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:NP_001259088.1 Gene:G9a / 30971 FlyBaseID:FBgn0040372 Length:1657 Species:Drosophila melanogaster


Alignment Length:1947 Identity:329/1947 - (16%)
Similarity:598/1947 - (30%) Gaps:646/1947 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  2087 NSVSICDEDTRNSN--TSLGNGWPASNPVEDAMLSAARNSSQVQMLKTLAWPKLDGNSAMATAIK 2149
            ||:|    .|.||:  ||...|....|      |:.|.:       |||.|              
  Fly     9 NSMS----STFNSDCATSTAEGGTLLN------LNLAED-------KTLKW-------------- 42

  Fly  2150 RRKLSKNLAEGVFLTLSSQQRNKKEMATVAGVSRRQSISETSVEGVATTSGSVRSKSFTWSAAKR 2214
                 :|||...|.:...:.::|:|      ..|:::.::..:|.:......|...    :|.|.
  Fly    43 -----RNLANNQFASKEKKHKDKEE------EERKEARNQEEIEDIKALLADVVDA----AAVKL 92

  Fly  2215 YFEKSEGREEA---AKMRIMQMDGVDDSITEFRIISGDGNLSTAQFSGQVKCDRCQCTYRNYDAF 2276
            ..|:::..|:.   .|..| :.:|..:...:..:...|..:...| :|  |.........:.:..
  Fly    93 EEEEAQNAEKVEPHTKCEI-EEEGRKEMEYDQDVAKQDSEMEKKQ-NG--KATSITVKMESNERA 153

  Fly  2277 QRHLPSCSPTMSSNETESDVSGQGMTNNATQISAESLNELQKQLLANAGGL--NYLQSATSFPQV 2339
            ::|....:.|.:..........:.....|.:...|.:....::|.|||..|  ..::.|.:.|.|
  Fly   154 EKHATEIATTSTERWENESFKTEQQNKKAAEKEEEPILAATQKLEANAEPLTTTRIEVAVASPLV 218

  Fly  2340 QSLGSLGQFGLQGLQQLQLQPQSLGSGFFLSQPNPATQANTDDLQIYANSLQSLAANLGGGFTLA 2404
            .|..|:                           ..|..|..          |..||...|..|||
  Fly   219 VSSASV---------------------------KLAADATN----------QMRAATSAGAATLA 246

  Fly  2405 QPTVTAPAQPQLIAVSTNPDGTQQFIQIPQTMQATTTPTATYQTLQATNTDKKIMLPLTAAGKPL 2469
            ...           |..:|.||::..:.|:.:.   |||:.        ||:.:.:.....||..
  Fly   247 DKN-----------VQVSPGGTRRSRRTPRPID---TPTSV--------TDEHVQVENKKFGKSE 289

  Fly  2470 KTVATKA-------AQQAAVKQRQLKSGHQVKPIQAKLQPH------PQQHQQQQQTQVQQPITV 2521
            :.....:       ....|:.:.|||| ...||....|.|.      |::.:.:.: :::....|
  Fly   290 QYTDCSSHLERFTLDDNTAIVRLQLKS-EPDKPSLTALSPEENSAPAPKRGRGRAR-KIRPDAEV 352

  Fly  2522 MGQNLLQP--------------QLLFQSSTQTQAPQIILPQAQPQNIISFVTGD----------- 2561
            ....::.|              :|..:...|.|...:::.:.:.:.:.....||           
  Fly   353 ETSEVILPCEDSLGEKKPGRKRKLPDEPIDQQQLSDLVVVKTEQEELGDAPLGDVKRMRRSVRLG 417

  Fly  2562 ---GSQGQPLQYISIPTAGEYKPQPQPTATPTFLTTAPGAGATYLQTDASGNLVLTTTPSNSGLQ 2623
               .:.|.|.:.:.....     .|||:|..:|...                        .|.:.
  Fly   418 NRLHADGSPWEEVKTEAL-----HPQPSAELSFAEV------------------------TSEIL 453

  Fly  2624 MLTAQSLQAQPQVIGTLIQPQTIQLGGGADGNQPGSNQQPLILGGTGGGSSG---LEFATTSPQV 2685
            .|.....:..|:..|...:...::|........|.:|      |.....|||   |:....|.:.
  Fly   454 PLAVLDEKTPPKKRGRKAKTPCVKLESETSCGLPFAN------GNKKTNSSGGCELQLPKRSKRR 512

  Fly  2686 ILATQPMYYGLETIVQNTVMSSQQFVSTAMPGMLSQNASFSATTTQVFQASKIEPIVDLPAGYVV 2750
            |..|       ..|::|..:..:                        |:...||.:....:...|
  Fly   513 IKPT-------PKILENDELRCE------------------------FETKHIERMTQWESAAAV 546

  Fly  2751 LNNTGDASSAGTFLNAASVLQQQTQDDTTTQILQNANFQFQSVPTSSGASTSM------------ 2803
            ..:....::.|...|:::..|:..:.|.:         .|:..|.....::::            
  Fly   547 DGDFETPTTGGNGSNSSTSRQKSDKSDGS---------NFEGGPGHPAGTSAIKKRLFSKSQRDI 602

  Fly  2804 -DYTSPVMVTAKIPPVTQIKRTNAQAKAAGISGVGKVPPQPQVVNKVLPTSIVTQQSQVQVKNSN 2867
             :|.:.::..:|:||...:::.....||:.|:  ....|:.:.:||.....: .:|.:..:|:..
  Fly   603 ENYGAAMLAKSKLPPCPDVEQFLNDIKASRIN--ANRSPEERKLNKKQQRKL-AKQKEKHLKHLG 664

  Fly  2868 LKQSQVKGKAASGTGTTCGAPPSIASKPLQKKTNMIRPIHKLEV-KPKVMKPTPKVQNQNHSLLQ 2931
            |:::.....:.:.:..|               .|...|..:::| ||.|   |.:|:|   |:.:
  Fly   665 LQKNHRDEPSDNDSSNT---------------DNEFFPTTRVQVGKPSV---TLRVRN---SVTK 708

  Fly  2932 QQQQQQPQLQQQIPAVVVNQVPKVTISQQRIPAQTQQQQLQQAQM---IHIPQQQQPLQQQQVQV 2993
            :.........::.|.|   |..|:|   :||.|:...:..:.|:.   |..|..:| |......:
  Fly   709 ELPTTATLKSRRNPVV---QAAKLT---RRIGARAAGEVTEAARASVPISTPDAEQ-LHSLDTSI 766

  Fly  2994 QPSM-PIITLAEAPVVQ--SQFV---MEPQALEQQELANRVQHFSTSSSSSSSNCSL------PT 3046
            |..: ||..|...|...  |:|:   .:|.           |:::.::..||..|::      ..
  Fly   767 QADVTPIRDLDMRPSTSRVSKFICLCQKPS-----------QYYARNAPDSSYCCAIDHIDDQKI 820

  Fly  3047 NVVNPMQQQAPSTTSSSTTRPTNR--------------------------------VLPMQQR-- 3077
            ...|.:     |:...:..||:.|                                ||..||.  
  Fly   821 GCCNEL-----SSEVHNLLRPSQRVSYMILCDEHKKRLQSHNCCAGCGIFCTQGKFVLCKQQHFF 880

  Fly  3078 --------------------QEPAPLSNECPVVSSPTPPKPVEQPIIHQMTSASVSKCYAQKSTL 3122
                                :|...:....||:....|...::.|   :.||....||    .:|
  Fly   881 HPDCAQRFILSTSYEKELGDEEDQGVKFSSPVLVLKCPHCGLDTP---ERTSTVTMKC----QSL 938

  Fly  3123 PSPVYEAELKVSSVLESIVPDVTMDAILEEQPVTESIYTEGLYEKNSPGESKTEQL--------- 3178
            |..:...:.|:...      .:|..:.|.:....|:..|.|...:|..|.|....|         
  Fly   939 PVFLRTQKYKIKPA------RLTTSSHLTQFGTVENANTPGATARNKGGLSTAVTLSAASSPASK 997

  Fly  3179 ----------LLQQQQREQLNQ----QLVNNGYL---LDKHTFQVEPMDTDVYREEDLEEEEDED 3226
                      ......|..||.    ||:....:   |..|........|..:...|:......|
  Fly   998 TNGAQRGRAGTSNSNSRHALNSINFAQLIPESVMNVVLRGHVVSASGRVTAEFTPRDMYYAVQND 1062

  Fly  3227 DDFSLKMATSACNDHEMSDSEEPAVKDKISKILDNLTNDDCAD-SIAT-------ATTMEVDASA 3283
            |                        .:::::||       .|| ::.|       .|.:.:.|.:
  Fly  1063 D------------------------LERVAEIL-------AADFNVLTPIREYLNGTCLHLVAHS 1096

  Fly  3284 GYQQMVEDVLATTAAQSAPTEEFEGALETAAVEAAATYINEMADAHVLDLKQLQNGVELELRRRK 3348
            |..||...:|...|:........:..|.||.:.|.   :||..|  :|:| .||.|.::      
  Fly  1097 GTLQMAYLLLCKGASSPDFVNIVDYELRTALMCAV---MNEKCD--MLNL-FLQCGADV------ 1149

  Fly  3349 EEQRTVSQEQEQSKAAIVPTAAAPEPPQPI----QEPKKMTGPHLLYEIQSEDGFTYKSSSITEI 3409
                .:.....::...|.......|..|.|    :..:.:|......:.|.|.|:|      ..:
  Fly  1150 ----AIKGPDGKTSLHIAAQLGNLEATQLIVDSYRTSRNITSFLSFIDAQDEGGWT------AMV 1204

  Fly  3410 WEKVFEAVQVARRAHGLTPLPEGPLADMGGIQMIGLKTNALKYLIEQLPGVEKCSKYTPKYHKRN 3474
            |........:.|    |..||:.....:..|.:.      :.:|:.|......|.       ..|
  Fly  1205 WAAELGHTDIVR----LASLPQAVFLKLINIFLF------ISFLLNQDADPNICD-------NDN 1252

  Fly  3475 GNV---STAANGAHGGNLGGSSASAALSVSGGDSH-----------------------GLLDYGS 3513
            ..|   ||..|       .|......|..||.|.:                       .|:..|:
  Fly  1253 NTVLHWSTLHN-------DGLDTITVLLQSGADCNVQNVEGDTPLHIACRHSVTRMCIALIANGA 1310

  Fly  3514 D---QDELEENAYDC-----ARC-------------EPYSNRSEYDMFSWLASRHRKQPIQVF-- 3555
            |   :::.|:..:||     :.|             .|...|: :.:.:..::....:||||.  
  Fly  1311 DLMIKNKAEQLPFDCIPNEESECGRTVGFNMQMRSFRPLGLRT-FVVCADASNGREARPIQVVRN 1374

  Fly  3556 -VQPSDNE------------------------LVPRR----------------------GTGSNL 3573
             :..|:||                        .:.||                      .:..|.
  Fly  1375 ELAMSENEDEADSLMWPDFRYVTQCIIQQNSVQIDRRVSQMRICSCLDSCSSDRCQCNGASSQNW 1439

  Fly  3574 PMAMKYRTLKETYKDYVGVF-------------------------------RSHIHGRGLYCTKD 3607
            ..|.........|:|...:|                               .....|.|:....:
  Fly  1440 YTAESRLNADFNYEDPAVIFECNDVCGCNQLSCKNRVVQNGTRTPLQIVECEDQAKGWGVRALAN 1504

  Fly  3608 IEAGEMVIEYAGELIRSTLTDKRERYYDSRGIGCYMFKIDDNLVVDATMRGNAARFINHCCEPNC 3672
            :..|..|..|.||::.:...|:|..  ||     |.|.:|:...:||...||..||.||.|||| 
  Fly  1505 VPKGTFVGSYTGEILTAMEADRRTD--DS-----YYFDLDNGHCIDANYYGNVTRFFNHSCEPN- 1561

  Fly  3673 YSKVVDI-LGHKH-------IIIFALRRIVQGEELTYDY--KFPFEDEK--IPCSCGSKRCR 3722
               |:.: :.::|       |..|:.|.|..|||:.:||  ||...:.:  :.|.|.:..|:
  Fly  1562 ---VLPVRVFYEHQDYRFPKIAFFSCRDIDAGEEICFDYGEKFWRVEHRSCVGCRCLTTTCK 1620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:295381
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134
FYRN 1891..1935 CDD:283589
FYRC 3388..3476 CDD:197781 14/87 (16%)
SET 3590..3710 CDD:214614 40/160 (25%)
G9aNP_001259088.1 ATP-synt_B 150..248 CDD:304375 23/134 (17%)
Ank_2 1056..1152 CDD:289560 26/142 (18%)
ANK 1088..1217 CDD:238125 30/154 (19%)
ANK repeat 1088..1120 CDD:293786 7/31 (23%)
ANK repeat 1124..1153 CDD:293786 11/44 (25%)
Ank_2 1127..1249 CDD:289560 26/153 (17%)
ANK 1155..1306 CDD:238125 28/180 (16%)
ANK repeat 1155..1196 CDD:293786 5/40 (13%)
ANK repeat 1199..1249 CDD:293786 10/65 (15%)
Ank_2 1205..1316 CDD:289560 22/134 (16%)
ANK repeat 1251..1283 CDD:293786 10/38 (26%)
ANK repeat 1285..1316 CDD:293786 3/30 (10%)
PreSET 1357..1466 CDD:128744 14/108 (13%)
SET 1495..1602 CDD:214614 38/117 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467638
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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