DRSC/TRiP Functional Genomics Resources

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Protein Alignment trx and Phf11b

DIOPT Version :10

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:XP_006518990.1 Gene:Phf11b / 236451 MGIID:3645789 Length:293 Species:Mus musculus


Alignment Length:145 Identity:38/145 - (26%)
Similarity:65/145 - (44%) Gaps:42/145 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1724 GSCGIKMRLDTRMCLFCRKSGEGLSGEEARLLYCGHDCW------------VHTNCAMWSAEVFE 1776
            |.|.|..:::.|.|..|.:               ||: |            .|.||.::|:.:.|
Mouse    15 GDCPIIEKMEKRTCALCPE---------------GHE-WSQIYFSPSGNIVAHENCLLYSSGLVE 63

  Fly  1777 ----EIDGSLQN-----VHSAVARGRMIKCTVCGNRGATVGCNVRSCGEHYHYPCARSIDCAFLT 1832
                ::..:::|     |...:.|||.:||:.|.|:|||:||:::||.::||..||.........
Mouse    64 SEAPDLPNTIRNFDVKSVKKEIGRGRRLKCSFCKNKGATMGCDLQSCTKNYHLSCAMEDHAILQV 128

  Fly  1833 DK-----SMYCPAHA 1842
            |:     .::|..||
Mouse   129 DEDHGTYKLFCQKHA 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:413390
PRK13914 <1006..>1224 CDD:237555
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134 32/129 (25%)
FYRN 1890..1937 CDD:461787
FYRC 3388..3476 CDD:197781
SET_KMT2A_2B 3575..3726 CDD:380947
Phf11bXP_006518990.1 PHD_SF 28..142 CDD:473978 32/129 (25%)
Blue background indicates that the domain is not in the aligned region.

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