DRSC/TRiP Functional Genomics Resources

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Protein Alignment trx and set-11

DIOPT Version :10

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:NP_001364763.1 Gene:set-11 / 185242 WormBaseID:WBGene00018023 Length:278 Species:Caenorhabditis elegans


Alignment Length:281 Identity:74/281 - (26%)
Similarity:105/281 - (37%) Gaps:90/281 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  3469 KYHKRNGNVSTAANGAHGGNLGGSSASAAL--------SVSGGDSHGLLDYGSDQDELEENAYDC 3525
            ||..|..:|:        |.|...|||...        |.:...|.|:...|...:.:|...:|.
 Worm    52 KYTSRIIDVA--------GQLACRSASPTFMCQCAGQCSTNCECSSGVFGEGGTVENMELLMWDT 108

  Fly  3526 AR-CEPYSNRSEYDMFSWLASRHRKQ----PIQVFVQPSDNELVPRRGTGSNLPMAMKYRTLKET 3585
            .| |..|.|.:     .|..:|..::    |:::|.                             
 Worm   109 VRECNEYCNCA-----LWCGNRVAQKGAMYPVEIFA----------------------------- 139

  Fly  3586 YKDYVGVFRSHIHGRGLYCTKDIEAGEMVIEYAGELIRSTLTDKRERY--YDSRGIGCYMFKI-- 3646
                    |....|.|:..:.||..|..:.|||||||     |..|..  :||    .::|:.  
 Worm   140 --------RDPWCGWGVRASVDIAFGTFIGEYAGELI-----DDEEAMDRHDS----TFLFETKV 187

  Fly  3647 -DDNLVVDATMRGNAARFINHCCEPNC--------YSKVVDILGHKHIIIFALRRIVQGEELTYD 3702
             .:.|.:||...||..|||||.|.||.        |.|:..|    |:..|..:.|.:|||||.|
 Worm   188 GSETLTIDAKYSGNYTRFINHSCAPNVKVANISWDYDKIQLI----HMCFFTDKAIRKGEELTID 248

  Fly  3703 Y-KFPFEDEKIPCSCGSKRCR 3722
            | :..:.::|.||.|.|..||
 Worm   249 YGEAWWANKKFPCLCKSSECR 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:413390
PRK13914 <1006..>1224 CDD:237555
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134
FYRN 1890..1937 CDD:461787
FYRC 3388..3476 CDD:197781 3/6 (50%)
SET_KMT2A_2B 3575..3726 CDD:380947 51/162 (31%)
set-11NP_001364763.1 PreSET 21..117 CDD:128744 18/72 (25%)
SET 75..270 CDD:394802 65/250 (26%)
Blue background indicates that the domain is not in the aligned region.

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