DRSC/TRiP Functional Genomics Resources

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Protein Alignment trx and set-32

DIOPT Version :10

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:NP_492529.2 Gene:set-32 / 183391 WormBaseID:WBGene00008062 Length:517 Species:Caenorhabditis elegans


Alignment Length:625 Identity:110/625 - (17%)
Similarity:183/625 - (29%) Gaps:229/625 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  3168 NSPGESKTEQLLLQQQQREQLNQQLVNNGYLLDKHTFQVEPMDTDVYREEDLEEEEDEDDDFSLK 3232
            :|..:|:|::.|.|...|..:.:.|.:|..:.:...|:.| .|..:|.....||..       ..
 Worm     2 SSKSKSRTKKKLRQHSSRGPITEMLASNMCIFEAPPFKAE-QDFPIYLAAGYEERR-------TF 58

  Fly  3233 MATSACNDHEMSDSEEPAVKDKISKILDNLTNDDCADSIATATTMEVDASAGYQQMV----EDVL 3293
            :..|||......|.|.  ......|:|:.:.||...:              |..:::    |||.
 Worm    59 LKESACLVETKPDVEN--YSQSHVKVLNKIRNDPHLN--------------GNWKLLPKYDEDVK 107

  Fly  3294 ATTAAQSAPTEEFEGALETAAVEAAATYINEMADAHVLDLKQLQNGVELELRRRKEEQRTVSQEQ 3358
            .|                                                :.|...::..:||.:
 Worm   108 GT------------------------------------------------MMRILGQRAMISQGR 124

  Fly  3359 EQSKAAIVPTAAAPEPPQ--PIQEPKKMTGPHLLYEIQSEDGFTYKSSSITEIWEKVFEAVQVAR 3421
            |..      .:..|:..|  |:..|..:| |.  ..|:..:..|:.:..|..::           
 Worm   125 EHE------ISTCPDSGQDVPLLSPTYIT-PR--KRIRVTENLTFNTLDIVPVY----------- 169

  Fly  3422 RAHGLTPLPEGPLADMGGIQMIGLKTNALKYLIEQLPGVEKCSKYTPKYHKRNGNVSTAANGAHG 3486
                 :.||:..|..:                  |:|.       |..:...:.||   .|....
 Worm   170 -----SDLPDEKLTSI------------------QIPD-------TLLFEYTDTNV---LNPCSA 201

  Fly  3487 GNLGGSSASAALSVSGGDSHGLLDYGSDQDELEENAY--DCARCEP----YSNR----------- 3534
            .|:    |.|.:                ..:.|||..  ||....|    |.|.           
 Worm   202 RNI----AKACI----------------MSQKEENTIRCDCCSSNPIVPCYENENCPCYKLNQKL 246

  Fly  3535 ------------SEYDMFSWLASRHRKQPIQVFVQPSDNELVPRRGTGSNLPMAMKYRTL--KET 3585
                        :::..|..:...:........:..|.:|....:|..:|..:.:..:.|  .|.
 Worm   247 QGLQINSSSHPPTKFASFDPVMFSNSNSTFDRCIGFSCSEACGCKGNCTNNSLLILNKKLFPLEI 311

  Fly  3586 YKDYVGVFRSHIHGRGLYCTKDIEAGEMVIEYAGELIRSTLTDKRERYYDSRGIGCYMFKIDDN- 3649
            |:....|      |.||..:..|.||..|:|:.||::.....|:..:.|      .|.....|| 
 Worm   312 YRSNENV------GFGLRSSVLIPAGTAVLEFTGEIVERNQLDRDSQDY------AYQLTDKDNS 364

  Fly  3650 --------------------------LVVDATMRGNAARFINHCCEPN-----CYSKVVDILGHK 3683
                                      ..:|...:||..|.|.|.|.||     .|.|.:. ..|.
 Worm   365 NWRRLLDTMKFSDDYKKFLKKLSYEEFFIDPKAKGNVGRMICHSCSPNLEIVRVYQKGLS-PAHV 428

  Fly  3684 HIIIFALRRIVQGEELTYDYKFPFEDEKI--PCSCGSKRC 3721
            |::..:|..|..|..||.||.:.:....:  .|.|||..|
 Worm   429 HLVFISLLNIYPGTPLTMDYGYNYMKNHLNGKCECGSFAC 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:413390
PRK13914 <1006..>1224 CDD:237555
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134
FYRN 1890..1937 CDD:461787
FYRC 3388..3476 CDD:197781 9/87 (10%)
SET_KMT2A_2B 3575..3726 CDD:380947 44/183 (24%)
set-32NP_492529.2 SET 307..455 CDD:214614 38/160 (24%)
Blue background indicates that the domain is not in the aligned region.

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