DRSC/TRiP Functional Genomics Resources

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Protein Alignment trx and mes-4

DIOPT Version :10

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:NP_506333.1 Gene:mes-4 / 179824 WormBaseID:WBGene00003222 Length:898 Species:Caenorhabditis elegans


Alignment Length:396 Identity:86/396 - (21%)
Similarity:133/396 - (33%) Gaps:141/396 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly  3351 QRTVSQEQEQSKAAIVPTAAAPEPPQPIQEPKKMTGPHLLYEIQSEDGFTY-KSSSITEIWEKVF 3414
            |..:.||.::.|..::...       |:.:..::|          ::.|:. |:|::..:||:.:
 Worm   403 QWLIPQENDKEKQPLMSIV-------PVSDIARLT----------KNYFSLAKNSTLRNLWEEKY 450

  Fly  3415 EAVQVARRAHGLTPLPEGPLADMGGIQMIGLKTNALKYLIEQLPGVEKCSKYTPKYHKRNGNVST 3479
            |       ....|.|...|....   .:.|....::.|         ||.....:||  |..|. 
 Worm   451 E-------EQADTALKRCPYVCK---TVFGRLRTSVYY---------KCEPKLEEYH--NNEVC- 493

  Fly  3480 AANGAHGGNLGGSSASAALSVSGGDSHGLLDYGSDQDELEENAYDCARCEPYSNRSEYDMFSWLA 3544
                    |..|:.....||         ..|.:|.       |:|                   
 Worm   494 --------NCEGADRCTKLS---------CQYLADD-------YEC------------------- 515

  Fly  3545 SRHRKQPIQVFVQPSDNELVPRRGTGSNLPMAMKYRTLKETYKDYVGVFRSHI-------HGRGL 3602
                        .||    ..::|...|..::|             |:....|       .|.|:
 Worm   516 ------------PPS----CSKKGVCHNRQVSM-------------GIVSEKIKLAATLCKGYGV 551

  Fly  3603 YCTKDIEAGEMVIEYAGELIRSTLTDKRE--RYYDSRGI------GCYMFKIDDNLVVDATMRGN 3659
            :....||..|.:.||.||:|     ||.|  |..||..|      ..||.::...|.|||...||
 Worm   552 FAKGQIEKDEYICEYVGEII-----DKAEKKRRLDSVSISRDFQANHYMMELHKGLTVDAARYGN 611

  Fly  3660 AARFINHCCEPNCYSKVVDILGHK---------HIIIFALRRIVQGEELTYDYKFPFEDEKIPCS 3715
            .:|:|||.|:||..|.|..:...|         ...|.|:|.|..|:|:|:.|....|:....|.
 Worm   612 ISRYINHSCDPNAASFVTKVFVKKTKEGSLYDTRSYIRAIRTIDDGDEITFSYNMNNEENLPDCE 676

  Fly  3716 CGSKRC 3721
            ||::.|
 Worm   677 CGAENC 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:413390
PRK13914 <1006..>1224 CDD:237555
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134
FYRN 1890..1937 CDD:461787
FYRC 3388..3476 CDD:197781 16/88 (18%)
SET_KMT2A_2B 3575..3726 CDD:380947 51/171 (30%)
mes-4NP_506333.1 SET_SETD2-like 538..683 CDD:380929 49/150 (33%)
Blue background indicates that the domain is not in the aligned region.

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