DRSC/TRiP Functional Genomics Resources

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Protein Alignment trx and set-23

DIOPT Version :10

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:NP_741320.1 Gene:set-23 / 176969 WormBaseID:WBGene00021515 Length:244 Species:Caenorhabditis elegans


Alignment Length:151 Identity:57/151 - (37%)
Similarity:72/151 - (47%) Gaps:40/151 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  3599 GRGLYCTKDIEAGEMVIEYAGELIRSTLTDKRERYYDSRGIGCYMFKIDDNLV------------ 3651
            |.|:...:.|.|||.|.|||||.|.....::|          |..|:.|||..            
 Worm   102 GFGVRAGEQIAAGEFVCEYAGECIGEQEVERR----------CREFRGDDNYTLTLKEFFGGKPV 156

  Fly  3652 ---VDATMRGNAARFINHCCEPNC------YSKVVDILGHKHIIIFALRRIVQGEELTYDY---K 3704
               ||..:|||..||:||.|||||      ..:::...|     |||.|.||:||||.|||   .
 Worm   157 KTFVDPRLRGNIGRFLNHSCEPNCEIILARLGRMIPAAG-----IFAKRDIVRGEELCYDYGHSA 216

  Fly  3705 FPFEDEKIPCSCGSKRCRKYL 3725
            ...|:.|: |.|.|::|||||
 Worm   217 IEGENRKL-CLCKSEKCRKYL 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:413390
PRK13914 <1006..>1224 CDD:237555
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134
FYRN 1890..1937 CDD:461787
FYRC 3388..3476 CDD:197781
SET_KMT2A_2B 3575..3726 CDD:380947 57/151 (38%)
set-23NP_741320.1 SET 1..241 CDD:394802 57/151 (38%)
Blue background indicates that the domain is not in the aligned region.

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