DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trx and set-16

DIOPT Version :10

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:NP_499819.3 Gene:set-16 / 176802 WormBaseID:WBGene00011729 Length:2475 Species:Caenorhabditis elegans


Alignment Length:3407 Identity:638/3407 - (18%)
Similarity:1004/3407 - (29%) Gaps:1390/3407 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   762 CSICSAVVSSKEVTQARKYGVVACDVCRKFFSKMTKKSISANSSTANTSSGSQQYLQCKGNEGSP 826
            |..|..|         .:.|.::.|:.|:     ...|.|..|.....::.|:|...|:.:....
 Worm    17 CENCMDV---------NRSGTMSLDMARQ-----CDMSSSCGSCQRMITADSRQCTTCRKSYHLS 67

  Fly   827 CSIHSAKSQLKNFKKFYKDRCTACWLKKCMISFQLPAAHRSRLSAILPPGMRGEAAAREEKSAEL 891
            |. .|..|.|.||.      |.:|                .|.|.:||..:...|:||..:..:.
 Worm    68 CD-SSDVSSLNNFV------CISC----------------RRRSQMLPDDVMLSASARPSRGQDA 109

  Fly   892 -LSPTGSLRFTSTASSSSPSVVASTSVKWKSSGDSTSALTSIKPNPLAEN---NVTFGSTPLLRP 952
             |||           .|.|||              ......::|.||..:   :..|......:.
 Worm   110 PLSP-----------FSDPSV--------------PQISLQMQPAPLPSSYPRSQDFNGDVYTQI 149

  Fly   953 AILENPLFLKISNAADQKLAAAEAISPSLTKKNSKQEKEK------VKESEQSEKLLSPTQAGTK 1011
            |.::.....:..|...|.||....:...::......:.::      .:.|:..|..:..:..|..
 Worm   150 AAMQQQRQQQQQNQVQQMLATQAQLMDEISDGGGTNDSDRNSSPFYQEASDYDEDFVPASTRGRG 214

  Fly  1012 KSGAAEAQVEEVQPQKEEAPQTSTTTQPSASNGASHGVPQAELAG---------ETNAT------ 1061
            :.|.|:.     :|.:..:..|...|.|..|...|....|| ::|         :|::|      
 Worm   215 RGGGAKK-----KPGRGGSTGTRRQTNPGPSGFFSATQLQA-MSGDFSHLHQPQQTSSTRGKRGK 273

  Fly  1062 ---GDTLKRQRIDLKGP---------------------RVKHVCRSASIVLGQPLATFGEDQQPE 1102
               |.::.||  ..|||                     :|::..:.|.:..|.|..   ...||.
 Worm   274 RGNGTSVPRQ--PGKGPGRGRGRGRGSAAAIAQLAQLQQVQYGAQGAPMFNGAPQL---HPTQPT 333

  Fly  1103 DAADMQQEI--------AAPVPSAIMEPSPEKPTHIVTDENDNCASCKTSPVGDESKPSKSSGSA 1159
            .|..:...:        |.|.|.|:..|.|:....||                    ||......
 Worm   334 VAPTLPPSVTYQNVAPTAPPAPPALQTPLPDPLPSIV--------------------PSFQQAPQ 378

  Fly  1160 QAEVKKATALGKEGTASAAGGSSAKVTTRNAAVASNLIVAASKKQRNGDIATSSSVTQSSNQTQG 1224
            ...:::...|..|                                           .:||.|:.|
 Worm   379 AVAIREVDELMLE-------------------------------------------DESSRQSGG 400

  Fly  1225 RKTKEHRQQRTLISIDFWENYDPAEVCQTGFGLIVTETVAQRA-LCFLCGSTGLDP---LIFCAC 1285
            .::.|....||.|            ||:      |.:...|:| :|.:|||.|..|   ::.|:.
 Worm   401 SRSDEPEYIRTAI------------VCR------VNDEFLQKACMCLVCGSIGKGPEGSMVACSN 447

  Fly  1286 CCEPYHQYCVQDEYNLKHGSFEDTTLMGSLLETTVNASTGPSSSLNQLTQRLNWLCPRCTVCYTC 1350
            |.:.||.|||              ||               ...||.......|.|..||||..|
 Worm   448 CAQTYHTYCV--------------TL---------------HDKLNSAVVGRGWRCLDCTVCEGC 483

  Fly  1351 NMSSGSKVK---CQKCQKNYHSTCLGTSKRLLGADR----PLICVNCLKCKSCSTTKVSKFVGN- 1407
            . :.|.:..   |.:|..:||..|:   |.||  |:    |..|..|.:|:.|:....|   || 
 Worm   484 G-TGGDEANLLLCDECDVSYHIYCM---KPLL--DKIPQGPWRCQWCSRCRRCNHKAAS---GND 539

  Fly  1408 ---LPMCTGCFKLRKKGNFCPICQRCYDDNDFDLKMMECGDCGQWVHSKCEGL-SDEQYNLLSTL 1468
               ..:|..|..|||    ||.|:|.|..|:   |::.|..|.:|.|..|||| :|||.      
 Worm   540 LTSQGLCFPCASLRK----CPRCERNYQLNE---KLIRCSQCSKWQHGACEGLYTDEQL------ 591

  Fly  1469 PESIEFICKKCARRNESSKIKAEEWRQAVMEEFKASLYSVLKLLSKSRQACALLKLSPRKKLRCT 1533
                                     .||.::..:.|             ||              
 Worm   592 -------------------------EQAAIDRMRCS-------------AC-------------- 604

  Fly  1534 CGASSNQGKLQPKALQFSSGSDNGLGSDGESQNSDDVYEFKDQQQQQQQRNANMNKPRVKSLPCS 1598
                      :||.:|.|..||                                    |.::.| 
 Worm   605 ----------RPKRVQPSGFSD------------------------------------VDTVWC- 622

  Fly  1599 CQQHISHSQSFSLVDIKQKIAGNSYVSLAEFNYDMSQVIQQSNCDELDIAYKELLSEQFPWFQNE 1663
                                   .||:|   :.|..:::                         :
 Worm   623 -----------------------DYVAL---DKDAHEIL-------------------------K 636

  Fly  1664 TKACTDALEEDMFESC----SGGNYEDLQDTGGVSASVYNEHSTSQAESRSGVLDIPLEEVDDFG 1724
            :|....||:..|.||.    |..:|:|          .||                |||:..|  
 Worm   637 SKYTPSALKNHMMESVGYRESFDHYDD----------DYN----------------PLEDSSD-- 673

  Fly  1725 SCGIKMRLDTRMCLFCRKSGEGLSGEEARLLYCGHDCWVHTNCAMWSAEVFEEIDGSLQNVHSAV 1789
                            :.:...:.|:.                                      
 Worm   674 ----------------QVTPLPIPGQR-------------------------------------- 684

  Fly  1790 ARGRMIKCTVCGNRGATVGCNVRSCGEHYHYPCARSIDCAFLTDKSMYCPAHAKNGNALKANGSP 1854
            .|||       ||.....|.|....|..|                 ...|.|.......:| .:.
 Worm   685 GRGR-------GNPSGRRGMNRIGIGGFY-----------------AKLPRHRIQALTEEA-AAA 724

  Fly  1855 SVTYESNFEVSRPVYVELDRKRKKLIE---PARVQ---FHIGSLEVRQLGAIVPRFSDSYEAVVP 1913
            :.:.|.:.:..||     .:.|:..:|   |.::|   |.|.::|.:.|          .:..|.
 Worm   725 AASSEDSKQAKRP-----RKSRRSQLEDAYPPQIQEAFFGIKAVEGKVL----------VDTPVD 774

  Fly  1914 INFLCSRLYWSSKEPWKIVEYTVRTTIQNSSSTLTALDVGRNYTVDHTNPNSKEVQLGMAQIARW 1978
            ..||.....|..:         .|:|                          |..:|.|......
 Worm   775 EPFLAEFNGWYKR---------TRST--------------------------KAFELCMTASEML 804

  Fly  1979 HTSLARSEFLENGGTDWSGEFPNPNSCVPPDENTEEEPQQQADLLPPELKDAIFEDLPHELLDGI 2043
            .|.:..:|||:..|.                      |..:.|.|         :|....||:. 
 Worm   805 RTDIDENEFLDCVGL----------------------PNMETDAL---------DDFDFNLLED- 837

  Fly  2044 SMLDIFLYDDKTDLFAISEQSKDGTQAMTSNQAQNQNQQAGGANSVSICDEDTRNSNTSLGNGWP 2108
                 |..|::.|....|.....|...|..:.|:. .:.:.|..|.::   |.|.|.:|.|....
 Worm   838 -----FDVDEENDELENSLLGAPGNTEMKEDAAEG-IEGSYGPTSFNL---DQRPSTSSAGGSLG 893

  Fly  2109 ASNPVEDAMLSA-------------ARNSSQVQMLK----TLAWPKLDGNSAMATA--------- 2147
            :.:|....|..|             ||:.||....:    :..|.:.:.|...||.         
 Worm   894 SQDPFHPGMNPANFAQHAPGVRNAIARSGSQTDNSERYQFSARWEEDEPNGLQATTAAVLYSNEK 958

  Fly  2148 --------------IKR-RKLSKNLAEGVFLTLSSQQRNKKEMATVAGVSRRQSISET------- 2190
                          :|: :||.:.|...|.|...::.|:.:..:......||.::..|       
 Worm   959 HGYLRQQFPNWVDRVKQIQKLWRTLNHEVRLDYVNRARDNRTRSGNRPRPRRTNVQSTDSPPPPQ 1023

  Fly  2191 -SVEGVATTSGSVRSKSFTWSAAKRYF-----------------------EKSEGREE------- 2224
             ..:..|..|.::...|......|:.|                       |:..|..|       
 Worm  1024 MGFKVPANPSSNMMGSSEQSMQPKQVFITHHLPMDVYQVYQDLKRVKFDRERLNGSLEEQLNKAR 1088

  Fly  2225 ------AAKMRIM--------QMDGVDDSITEFRIISGDGNLSTAQFSGQVKCDRCQCTYRNYDA 2275
                  |||.|.|        ..||.:..:.|    |....|:|  .:.|:|..:.:......| 
 Worm  1089 KQKKNLAAKKRQMVKTQTAAPDYDGRNIDLNE----SDQQTLAT--LTEQIKVTQAEIELHRRD- 1146

  Fly  2276 FQRHLPSCSPTMSSNETESDVSG----QGMTNNATQISAESL--------------NELQKQLLA 2322
            .::|             ||::|.    .|:..|..::..|.:              :|:..|...
 Worm  1147 LKKH-------------ESNLSDFVMKHGILRNEHEVKREDVQLSAIRDQQYAAHADEMLAQQAQ 1198

  Fly  2323 NAGGLNYL--------QSATSFPQVQSLGSLGQFGLQGLQQLQLQPQSLGSGFFLSQPNPATQAN 2379
            |. ||..:        |:|.|.|.:..    .|...|.:.|:|::....|.....:||....|.|
 Worm  1199 NQ-GLGQVHPPVLVAPQAAISLPMLNQ----QQQHHQRMMQMQMRGGPPGQFMMRAQPPQQPQIN 1258

  Fly  2380 TDDLQIYANSLQSLAAN----LGGGFTLAQPTVTAPAQPQLIAVSTNPDGTQQFIQIPQTMQATT 2440
            ..:.:|....|.....|    :||   :....:|.|....:                        
 Worm  1259 MHNHEIAKRMLMQQFRNAHPVMGG---IRHDEITDPIMRDV------------------------ 1296

  Fly  2441 TPTATYQTLQATNTDKKIMLPLTAAGKPLKTVATKAAQQAAVKQRQLKSGHQVKPIQAKLQPHPQ 2505
                 |..|:|...|             :.|||.:.|.|||        |.|..|      ||..
 Worm  1297 -----YDCLEAIVFD-------------VHTVAEREAMQAA--------GQQPPP------PHIM 1329

  Fly  2506 QHQQQQQTQVQQPITVMGQNLLQ----PQLLFQSSTQTQAPQIILPQAQ---PQNIISFVTGDGS 2563
            |...|     |.|....|..|:.    |||..:...| |.|.:.|||..   |:.......|.|:
 Worm  1330 QRMMQ-----QHPGGPGGPRLIMPGQFPQLQGRRIPQ-QPPPVQLPQVDVDPPKTAAKRKKGGGN 1388

  Fly  2564 QGQPLQYISIPTAGEY------------------KPQPQPTATPTFLTTAPGAGATYLQTDASGN 2610
            ..:...  |.|.||||                  |.|.:|.      ...||....         
 Worm  1389 PKKNAS--SYPAAGEYDAWIEQMRMRFRLCPDIPKKQKEPR------LNRPGCEFV--------- 1436

  Fly  2611 LVLTTTPSNSGLQMLTAQSLQAQPQVIGTLIQPQTIQLGGGADGNQPGSNQQPLILGGTGGGSSG 2675
                    :.||..:..::.:.:..::|..          ||...:.|:.    :.|....|...
 Worm  1437 --------SHGLTDMAVRATKKRTPLVGEF----------GAMRVKRGTR----LFGNEERGEKS 1479

  Fly  2676 LEFATTSPQVILATQPMYYGLETIVQNTVMSSQQFVSTAMPGMLSQNASFSATTTQVFQASKIEP 2740
            :.|                                                    |.....::||
 Worm  1480 IMF----------------------------------------------------QDLNLYQVEP 1492

  Fly  2741 IVDLPAGYVVLNNTGDASSAGTFLNAASVLQQQTQDDTTTQILQNANFQFQSVPTSS-------- 2797
            .:.|.|.|               .|....::.....|...||:..        |||:        
 Worm  1493 QIRLFALY---------------NNPLPTMEDDVFRDEEDQIIDK--------PTSALQKLLNKK 1534

  Fly  2798 -GASTSMDY---TSPVMVTAKIPPVTQ--IKRTNAQAKAAGISGVGKVPPQPQVVNKVLPTSIVT 2856
             |||.:||:   .:..|....|||..:  :...|.:|:            :...|..|..|..:|
 Worm  1535 RGASGAMDHIRSRARYMEETNIPPAPERGMFYENVEAE------------EEVTVELVFNTCDIT 1587

  Fly  2857 QQSQVQVKNSNLKQSQVKGKAASGTGTTCGAPPSIASKPLQKKTNMIRPIHKLEVKPKV---MKP 2918
            ::|.|..|..                 .||           :....||.:  |.:|.:|   |:.
 Worm  1588 EESSVDEKKD-----------------VCG-----------RLHEQIRDL--LAIKDEVAWSMED 1622

  Fly  2919 TPKVQNQNHSLLQQQQQQQPQLQQQIPAVVVNQVPKVTISQQRIPAQTQQQQLQQAQMIHIPQQQ 2983
            ||              .:.|..:...|...|..|.: |.|..|.|::..::::::    .:.::.
 Worm  1623 TP--------------PESPVSRSPEPEATVGAVQQ-TSSTSRAPSEATEREIKR----EVEEEA 1668

  Fly  2984 QPLQQQQVQVQPSMPIITLAEAPVVQSQFVMEPQALEQQELANRVQHFSTSSSSSSSNCSLPTNV 3048
            .|:                  ||.::.: ::||.              .:.:||...||      
 Worm  1669 APV------------------APEIKRE-IVEPS--------------QSQNSSQCKNC------ 1694

  Fly  3049 VNPMQQQAPSTTSSSTTRPTNRVLPMQQRQEPAPLSNECPVVSSPTPP----------KPVEQPI 3103
                 |:|..:.||     |:.|....::...||..:.....::|.||          .|.|:..
 Worm  1695 -----QKALESHSS-----TSIVTVKAEKLNLAPTGSVVTTRAAPVPPGVPGAPGAPIAPSEEKT 1749

  Fly  3104 IHQMTSASVSKCYAQ-KSTLPSPVYEAELKVSSVLESIVPDVTMDAILEEQPVTESIY------- 3160
            ..::.|....|||.: .|...:|:.|.|:..:                 ||.|:|.:|       
 Worm  1750 KEELASFCSKKCYYELASATRAPLTEEEVAAA-----------------EQHVSEEVYNKLKQVL 1797

  Fly  3161 TEGLYEKNSPGESKTEQL--------LLQQQQREQLNQQLVNNGYLLDKHTFQVE-PMDTDVYRE 3216
            ||.:.:..|.|:....||        ::.:.:||  |..:|....|:.    .|| |.:....|.
 Worm  1798 TENIVKAVSQGKKPDPQLTSPRDTRCMMDEGRRE--NVTIVPVASLIG----AVEAPKEAPSQRA 1856

  Fly  3217 EDLEEEEDEDDDFSLKMATSACNDHEMSDSEEPAVKDKISKI--------LDNLTNDDC---ADS 3270
            .:..|:        .|..|.:..|..::..::.|......||        ||......|   .|.
 Worm  1857 AEAAED--------WKAYTKSIWDSFVNIQQQHAHHILSPKIGVPHPPYHLDKRICVFCGGIGDG 1913

  Fly  3271 IATATTMEVDASAGYQQMVEDVLATTAAQSAPTEEFE---GAL---ETAAVEAAAT--------- 3320
            ..|.....:..:..|.     |....|..||  |.||   |.|   :.|.:.||.|         
 Worm  1914 ETTRCGRLISLTEFYW-----VHVNCALWSA--EVFENQTGGLTNVDRAVLRAAQTACDHCKRPG 1971

  Fly  3321 ------YINEMADAHVLDLKQLQNGVELELRRRKEEQRTVSQEQEQSKAAIV------------- 3366
                  .:|...:.|||...| .||..:     |:......|.::.|..|||             
 Worm  1972 ASVKCHKMNCGVNYHVLCAMQ-NNGFFI-----KDRTFICKQHEKVSNQAIVGRLDALRRIYVKR 2030

  Fly  3367 ---------------PT--------------AAAPEP-----------PQPIQEPKKMTGP---- 3387
                           ||              :..|:.           |...:..:....|    
 Worm  2031 DENTMLTRLFELTDGPTLCMRLGAFTFYKIGSITPKQLKRFHTKDYIFPNNYRITRLFWSPKSHR 2095

  Fly  3388 -HLLYEIQSED---------------GFTYKSSSITEIWEKVFEAVQVARRAHGLTPLPEGPLAD 3436
             .:::|...||               ...||:.|.::.|:.::|.|      |.|....:|....
 Worm  2096 ERMMFECIIEDRNNQPIFVVKSLEDPTICYKAVSASKAWQPIYEKV------HQLREQQQGDSLK 2154

  Fly  3437 MGGIQ-----MIGLKTNALKYLIEQLPGVEK------------------------CSKYTPK--- 3469
            ..|.|     :.||..||:..:.|.|||.:.                        |::..|:   
 Worm  2155 FFGSQICGETLFGLNENAITKITESLPGFDTIFTYQHRHQNSPVLELPLAENLMGCARAEPRNRT 2219

  Fly  3470 --YHKRNGNVSTAANGAHGGNLGGSSASAAL----------------------SVSGGDSHGLLD 3510
              .|.|...........|.|:..|.|:.|.:                      |.:.|.:.|:..
 Worm  2220 IGQHFRTKPQPMGGTHHHIGSASGLSSQATIIASSSSSANESLQSRQAATSVTSANSGRTRGVRS 2284

  Fly  3511 YGSDQDELEENAYDCARCEPYSNRSEYDMFSWLASRHRKQPIQVFVQPSDNELVPRRGTGSNLPM 3575
            |.:::......|:.                               :.|....|..|..|..|...
 Worm  2285 YYTEEAAARARAFG-------------------------------IPPEMASLSLRMETTQNAQT 2318

  Fly  3576 AMK-YRTLKETYKDYVGVFRSHIHGRGLYCTKDIEAGEMVIEYAGELIRSTLTDKRERYYDSRGI 3639
            |.. |:.::..:||.|.:.||.|.|.|||...||..|:.:|||.||:|||.:.:.||..|.::..
 Worm  2319 AFSAYQKMRREWKDRVYLARSRIAGLGLYAKVDISMGDFIIEYKGEIIRSEVCEVREIRYVAQNR 2383

  Fly  3640 GCYMFKIDDNLVVDATMRGNAARFINHCCEPNCYSKVVDI---LGHKHIIIFALRRIVQGEELTY 3701
            |.|||:||:..|:||||.|..||:|||.|:|||.::::|.   ...|.|||.|.|.|...|||||
 Worm  2384 GVYMFRIDEEWVIDATMAGGPARYINHSCDPNCSTQILDAGSGAREKKIIITANRPISANEELTY 2448

  Fly  3702 DYKFPFE--DEKIPCSCGSKRCRKYLN 3726
            ||:|..|  .:||||.||:..|.|::|
 Worm  2449 DYQFELEGTTDKIPCLCGAPNCVKWMN 2475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:413390 20/93 (22%)
PRK13914 <1006..>1224 CDD:237555 42/264 (16%)
PHD1_KMT2A_like 1268..1344 CDD:276981 19/78 (24%)
PHD 1346..1390 CDD:214584 15/50 (30%)
PHD3_KMT2A_like 1423..1479 CDD:276983 18/56 (32%)
ePHD_KMT2A_like 1737..1841 CDD:277134 11/103 (11%)
FYRN 1890..1937 CDD:461787 6/46 (13%)
FYRC 3388..3476 CDD:197781 26/136 (19%)
SET_KMT2A_2B 3575..3726 CDD:380947 72/156 (46%)
set-16NP_499819.3 PHD_SF 42..84 CDD:276966 12/48 (25%)
PHD4_KMT2C_like 427..477 CDD:276987 19/78 (24%)
PHD5_KMT2C_like 479..524 CDD:276988 15/50 (30%)
PHD6_KMT2C_like 554..604 CDD:276989 22/100 (22%)
HMG_KMT2C-like 936..1002 CDD:438813 11/65 (17%)
ePHD2_KMT2C_like 1904..2008 CDD:277136 25/116 (22%)
FYRN 2053..2104 CDD:461787 4/50 (8%)
FYRC 2112..2199 CDD:197781 19/92 (21%)
SET_KMT2C_2D 2319..2474 CDD:380948 72/154 (47%)

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