DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trx and met-1

DIOPT Version :9

Sequence 1:NP_476769.1 Gene:trx / 41737 FlyBaseID:FBgn0003862 Length:3726 Species:Drosophila melanogaster
Sequence 2:NP_491340.2 Gene:met-1 / 172026 WormBaseID:WBGene00016603 Length:1604 Species:Caenorhabditis elegans


Alignment Length:1310 Identity:240/1310 - (18%)
Similarity:395/1310 - (30%) Gaps:526/1310 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly  2456 KKIMLPLTAAGKPLKTVATKAAQQAAVKQRQLKSGHQVKPIQAKLQPHPQQHQQQQQ-------- 2512
            :|::||    .|..:.|.|:....|||     :.|..||..:|| .|.||...::.:        
 Worm     4 RKVVLP----KKRTEMVQTRRKTAAAV-----QDGGAVKENKAK-PPAPQTPTKRAKRGRPPKIK 58

  Fly  2513 ---TQVQQPITVMGQNLLQPQLLFQSSTQTQAPQIILPQAQPQNIISFVTGDGSQGQPLQYISIP 2574
               ..:..|.|  ..||:..:||.:|.:|.                |.:|.:.......:...|.
 Worm    59 TDANTLNTPST--SSNLVDDKLLIESESQD----------------SILTNEADSFLEKEVEEIE 105

  Fly  2575 TAGEYKP----QPQPTATPTFLTTAPGAGATYLQTDASGNLVLTTTPSNSGLQMLTAQSLQAQPQ 2635
            .:.:..|    .|:   .|:.|.....:....::||.....|    |.|..:.:|..:|:|.:|.
 Worm   106 DSSDILPDKINSPE---KPSVLVKRRSSTRLKVKTDEDEKDV----PVNIEVAVLEEKSIQIEPT 163

  Fly  2636 VIGTLIQPQTIQLGGGADGNQPGSNQQPLILGGTGGGSSGLEFATTSPQVILATQPMYYGLETIV 2700
            .......|            ||.::..||:                        :|    :|.||
 Worm   164 SPAHPEDP------------QPSTSSLPLV------------------------EP----IEDIV 188

  Fly  2701 QNTVMSSQQFVSTAMPGMLSQNASFSATTTQVFQASKIEPIVDLPAGYVVLNNTGDASSAGTFLN 2765
            :              |...:.:|....:..:.....:.||::..||                   
 Worm   189 E--------------PNEPTSSADPPVSNIKDEDIKEEEPLIKKPA------------------- 220

  Fly  2766 AASVLQQQTQDDTTTQILQNANFQFQSVPTSSGASTSMDYTSPVMVTAKIPPVTQIKRTNAQAKA 2830
                     .|::.:..:.|:.....|..:.:...|...::.|:..|   ||....||       
 Worm   221 ---------SDESESMDIANSESGNDSDSSEADPRTIPSFSIPLPDT---PPPNFAKR------- 266

  Fly  2831 AGISGVGKVPPQPQVVNKVLPTSIVTQQSQVQVKNSNLKQSQVKGKAASGTGTTCGAPPSIASKP 2895
                  |::                    .|.|...|.|||   |::.|....   |....||.|
 Worm   267 ------GEI--------------------HVDVDQKNSKQS---GESQSPWER---AREKSASNP 299

  Fly  2896 LQKKTNMIRP-IHKLEVKPKVMKPTPKVQN-QNHSLLQQQQQQQPQLQQQIPAVVVNQVPKVTIS 2958
            |...| |.|| ||.|.         |..|: .|.|                    |:.:|..   
 Worm   300 LSSPT-MSRPRIHFLH---------PAYQSFTNDS--------------------VSPLPPP--- 331

  Fly  2959 QQRIPAQTQQQQLQQAQMIHIPQQQQPLQQQQVQVQPSMPIITLAEAPVVQSQFVMEPQALEQQE 3023
                                 |.:..|.:::.....|:...:|..:|..:.   :::..|.||. 
 Worm   332 ---------------------PPEPAPAREKVENGGPTTFKMTFKKAANIP---ILKTSAFEQP- 371

  Fly  3024 LANRVQHFSTSSSSSSSNCSLPTNVVNPMQQQAPSTTSSSTTRPTNRVLPMQQRQEPAPLSNECP 3088
                    |:...|||.:.|:..:.||      .||:.:|.:.|..|     ........|||.|
 Worm   372 --------SSPPPSSSVSSSISLSEVN------SSTSIASESSPAKR-----SSNFDLTASNELP 417

  Fly  3089 VVSSPTPPKPVEQPIIHQMTSASVSKCYAQKSTLPSPVYEAELKVSSVLESIVPDVTMDAILEEQ 3153
                  ||:.||.|.:...             .:|..|..||  ..|.:.|..|     .:|...
 Worm   418 ------PPQMVELPKLSFF-------------NMPPAVRSAE--DDSAMTSEEP-----ILLLRS 456

  Fly  3154 PVTESIYTEGLYEKNSPGESKTE-QLLLQQQQREQLNQQLVNNGYLLDKHTFQVEPMDTDVYREE 3217
            |.:.:...:.|:....|....|| ::...:...|::||.:...           |..:.||...|
 Worm   457 PNSATPDDDALFLTTPPPPKMTESEIQALKVATEKVNQVIARR-----------EDSEKDVRHRE 510

  Fly  3218 DLEEEEDEDDDFSLKMATSACNDHEMSDSEEPAVKDKISKILDNLTNDDCADSIATATTMEVDAS 3282
            |.::.:...||                       :|:.|:..|:..||                .
 Worm   511 DRDDYDRRRDD-----------------------RDRRSRKTDSERND----------------Q 536

  Fly  3283 AGYQQMVEDVLATTAAQSAPTEEFEGALETAAVEAAATYINEMADAHVLDLKQLQNGVELELRRR 3347
            .|.|:                |:.|........|....:..|..:..:...|.       |.||:
 Worm   537 RGRQR----------------EDDERRAREREREVTKRHDREREEMRLQKQKD-------EERRK 578

  Fly  3348 KEEQRTVSQEQEQSKAAIVPTAAAPEPPQPIQEPKKMTGPHLLYEIQSEDGFTYKSSSITEIWEK 3412
            |:|:..:.:|.::.|        ..|....::|.||        :|:.|:      ..|.| :|.
 Worm   579 KDEEERIQKENDEKK--------QKEDEAKMEEEKK--------KIKEEE------MKIPE-FEL 620

  Fly  3413 VFEAVQVARRAHGLTPLPEGPLADMGGIQMIGLKTNALKYLIEQLPGVEKCSKYTPKYHKRNGNV 3477
            :.|:..:.|.|:                                   .:|....|.:.|:..|| 
 Worm   621 ISESKYLTRNAN-----------------------------------KKKTESLTCECHRTGGN- 649

  Fly  3478 STAANGAHGGNLGGSSASAALSVSGGDSHGLLDYGSDQDELEENAYDCARCEPYSNRSEYDMFSW 3542
                                                              |              
 Worm   650 --------------------------------------------------C-------------- 650

  Fly  3543 LASRHRKQPIQVFVQPSDNELVPRRGTGSNLPMAMKYRTLKETY--KDYVGVFRSH---IHGRGL 3602
                            |||..| .|...:..|.:.:.:...:.:  |.|..|...|   ..|.||
 Worm   651 ----------------SDNTCV-NRAMLTECPSSCQVKCKNQRFAKKKYAAVEAFHTGTAKGCGL 698

  Fly  3603 YCTKDIEAGEMVIEYAGELI-------RST--LTDKRERYYDSRGIGCYMFKIDDNLVVDATMRG 3658
            ...|||:.|..:|||.||::       |.|  ..||:.:::.....|.|        .:|||:.|
 Worm   699 RAVKDIKKGRFIIEYIGEVVERDDYEKRKTKYAADKKHKHHYLCDTGVY--------TIDATVYG 755

  Fly  3659 NAARFINHCCEPN--CYSKVV-----DILGHKHIIIFALRRIVQGEELTYDYKF-PFEDEKIPCS 3715
            |.:||:||.|:||  |....|     |:   ..:..|:.|.|..|||:|:||:| .:..:...|.
 Worm   756 NPSRFVNHSCDPNAICEKWSVPRTPGDV---NRVGFFSKRFIKAGEEITFDYQFVNYGRDAQQCF 817

  Fly  3716 CGSKRCRKYL 3725
            |||..|..::
 Worm   818 CGSASCSGWI 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trxNP_476769.1 NR_DBD_like 762..>856 CDD:295381
PHD1_KMT2A_like 1268..1344 CDD:276981
PHD 1346..1390 CDD:214584
PHD3_KMT2A_like 1423..1479 CDD:276983
ePHD_KMT2A_like 1737..1841 CDD:277134
FYRN 1891..1935 CDD:283589
FYRC 3388..3476 CDD:197781 11/87 (13%)
SET 3590..3710 CDD:214614 45/139 (32%)
met-1NP_491340.2 PHA03283 <219..308 CDD:223032 28/159 (18%)
AWS 637..682 CDD:197795 12/126 (10%)
SET 694..810 CDD:214614 43/126 (34%)
tolA_full <1300..>1375 CDD:274303
WW 1366..1393 CDD:238122
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165881
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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