DRSC/TRiP Functional Genomics Resources

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Protein Alignment MetRS-m and MES1

DIOPT Version :9

Sequence 1:NP_001262564.1 Gene:MetRS-m / 41733 FlyBaseID:FBgn0027083 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_011780.3 Gene:MES1 / 853181 SGDID:S000003496 Length:751 Species:Saccharomyces cerevisiae


Alignment Length:611 Identity:132/611 - (21%)
Similarity:236/611 - (38%) Gaps:140/611 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VTTPIFYVNAAPHIGHLYSAVI-ADAHCRYQRLRYPEQDVRLCTGTDEHGTKIQQAASLHGVPVA 85
            :|:.:.|||..||:|::..:|: ||...||.:.|  ..:.....||||:||..:..|...||...
Yeast   200 ITSALPYVNNVPHLGNIIGSVLSADIFARYCKGR--NYNALFICGTDEYGTATETKALEEGVTPR 262

  Fly    86 KYCDDISQRYREVFRSASIQQDDFIRTTEDRHKRAVANFWRTLHTRGHIYSAAYSGWYCVSDETF 150
            :.||...:.:.:|::...|..|.|.|||.|:......:.:..|::.|::...:....||....::
Yeast   263 QLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNGYLEEQSMKQLYCPVHNSY 327

  Fly   151 LTD-------SQLRLDEATG-----------------TRYSLESGHPVEWTEETNY----MFRLS 187
            |.|       .:...|:|.|                 .|..|:...|     |..|    ...|.
Yeast   328 LADRYVEGECPKCHYDDARGDQCDKCGALLDPFELINPRCKLDDASP-----EPKYSDHIFLSLD 387

  Fly   188 QFQDDVRHWV-KTEARVRPAKFEKILLDT-LSEPLPDVSVSRPSNRVHWAIPVPDD--DSQTVYV 248
            :.:..:..|| |.......:|..|.:..: |.:.|....::|.   :.|..|||.:  ..:.:||
Yeast   388 KLESQISEWVEKASEEGNWSKNSKTITQSWLKDGLKPRCITRD---LVWGTPVPLEKYKDKVLYV 449

  Fly   249 WLDALVNYLSSVGYPDEKFSAHWPPAQ-----QVIGKDILKFHGIYWTAFLLAAGLEPPGQLYVH 308
            |.||.:.|:|......:::...|...:     |.:|||.:.||.:.:          |..||...
Yeast   450 WFDATIGYVSITSNYTKEWKQWWNNPEHVSLYQFMGKDNVPFHTVVF----------PGSQLGTE 504

  Fly   309 SHWTV------------DGQKMSKSK------HNVVDPLQAAQQYTMEGL-----RYFLLREGVA 350
            .:||:            :..|.|||:      :|..|          .|:     ||:|......
Yeast   505 ENWTMLHHLNTTEYLQYENGKFSKSRGVGVFGNNAQD----------SGISPSVWRYYLASVRPE 559

  Fly   351 HSDGNYSHVKAQRILNSELADTLGNLLSRASAKSLNP--GQIYPSPSAEHLADLLRSLDVAKRLQ 413
            .||.::|........||||...|||.::|. .|.:|.  ..:.|....:.:::           .
Yeast   560 SSDSHFSWDDFVARNNSELLANLGNFVNRL-IKFVNAKYNGVVPKFDPKKVSN-----------Y 612

  Fly   414 DSLLQLSERCESHY----ECNHFHLVADTTMAALHAANNFFESSK-PWTLKAGAPDGNQARLETI 473
            |.|::......|:|    |..|.....:..|:.....|.|.:.:| ..||.:.:|:.:.|    :
Yeast   613 DGLVKDINEILSNYVKEMELGHERRGLEIAMSLSARGNQFLQENKLDNTLFSQSPEKSDA----V 673

  Fly   474 IAMTMDALRLSGIVLQPIIPQLANRLLDKLSVPTAQRGWNYLAESFATSPNSSNSPAGLGESRQL 538
            :|:.::.:.....::.|.:|::..::...|:.|..:     :.:.|..:              .|
Yeast   674 VAVGLNIIYAVSSIITPYMPEIGEKINKMLNAPALK-----IDDRFHLA--------------IL 719

  Fly   539 DGQT---SALLFQRI----LEETSAK 557
            :|..   :..|||||    ::|..||
Yeast   720 EGHNINKAEYLFQRIDEKKIDEWRAK 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRS-mNP_001262564.1 MetRS_core 20..356 CDD:173907 90/394 (23%)
PRK11893 21..553 CDD:237012 129/605 (21%)
Anticodon_Ia_like 365..503 CDD:299868 28/144 (19%)
MES1NP_011780.3 MetRS-N 11..132 CDD:401537
PLN02610 190..>750 CDD:215329 132/611 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0143
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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