DRSC/TRiP Functional Genomics Resources

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Protein Alignment MetRS-m and mars2

DIOPT Version :9

Sequence 1:NP_001262564.1 Gene:MetRS-m / 41733 FlyBaseID:FBgn0027083 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_021329980.1 Gene:mars2 / 566565 ZFINID:ZDB-GENE-111201-1 Length:595 Species:Danio rerio


Alignment Length:568 Identity:257/568 - (45%)
Similarity:351/568 - (61%) Gaps:32/568 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SHYVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRL-RYPEQDVRLCTGTDEHGTKIQQAASLHGV 82
            ::|:|||||||||.|||||:||||.||...||:.| ||   :.|..|||||||.||||||...|.
Zfish    46 AYYITTPIFYVNAPPHIGHVYSAVTADCLHRYKLLQRY---NSRFATGTDEHGLKIQQAAGSAGK 107

  Fly    83 PVAKYCDDISQRYREVFRSASIQQDDFIRTTEDRHKRAVANFWRTLHTRGHIYSAAYSGWYCVSD 147
            ....:|.::|:.::.||:...|...|:|||||.||::||.:||..|.::.:||...|.|||...|
Zfish   108 DPLNFCTEVSESFKHVFQRCGISYTDYIRTTEKRHRQAVEHFWTVLQSKSYIYKGTYEGWYSTPD 172

  Fly   148 ETFLTDSQLR-LDEATGTR--YSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKTEAR-VRPAKF 208
            |:|||::|:. ..::.|.|  .|.||||.|||..|.|||||||.|...:.||:::... ::|.||
Zfish   173 ESFLTETQVTDSTDSEGRRIKVSTESGHKVEWMNEDNYMFRLSDFHTQLLHWLRSNPNTIQPVKF 237

  Fly   209 EKILLDTL-SEPLPDVSVSRPSNRVHWAIPVPDDDSQTVYVWLDALVNYLSSVGYPDEKFSAHWP 272
            :.::|..| .:.:||:||||..:|:.|.||||.|..||:|||||||||||:.|||| :..|..|.
Zfish   238 QHLVLQWLEDDDIPDLSVSRQKSRLQWGIPVPGDPEQTIYVWLDALVNYLTVVGYP-QNHSKWWS 301

  Fly   273 PAQQVIGKDILKFHGIYWTAFLLAAGLEPPGQLYVHSHWTVDGQKMSKSKHNVVDPLQAAQQYTM 337
            ....|:||||||||.|||.||||||||..|.::||||||||:|:|||||..||::||::.:::|:
Zfish   302 VVHHVVGKDILKFHAIYWPAFLLAAGLALPQKIYVHSHWTVEGKKMSKSIGNVINPLESIEKFTV 366

  Fly   338 EGLRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNLLSRASAKSLNPGQIYPSPS-----AE 397
            :||||||||:||..||.:|...|..::.||||||.||.||:|.:|.|||..|:||..|     |.
Zfish   367 DGLRYFLLRQGVPDSDCDYYDDKVMKMCNSELADALGGLLNRCTAPSLNLTQVYPRFSNSCFPAV 431

  Fly   398 HLADLLRSLDVAKRLQDSLLQLSERCESHYECNHFHLVADTTMAALHAANNFFESSKPWTLKAGA 462
            .|:....|.|.  |:.:::..|....|.|:|..|.:...:...|.:...|.|.:...||.|....
Zfish   432 GLSGKAVSEDY--RMIEAVSALPGIIEQHFENMHVYKALEAIGACVRLTNGFVQRHAPWKLDRNN 494

  Fly   463 PDGNQARLETIIAMTMDALRLSGIVLQPIIPQLANRLLDKLSVPTAQRGWNYLAESFATSPNSSN 527
            |: .|..|:||:.::::.||:.||:|||::|.||:::|.:|.|...:|.||.|        |..|
Zfish   495 PE-EQQWLDTILHVSLECLRIYGILLQPVVPDLADKILSRLGVTPEERSWNSL--------NFLN 550

  Fly   528 SPAGLG---ESRQLDGQTSALLFQRILEETSAKEVKEQKPQPAKRSKS 572
            ...|..   |.|.| |....:||.|:  |.|..:.|..|.....:|||
Zfish   551 KFQGRECALEGRAL-GPDLGVLFSRL--ERSQIKGKTTKKGTQPKSKS 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRS-mNP_001262564.1 MetRS_core 20..356 CDD:173907 181/341 (53%)
PRK11893 21..553 CDD:237012 250/545 (46%)
Anticodon_Ia_like 365..503 CDD:299868 51/142 (36%)
mars2XP_021329980.1 PRK12267 45..594 CDD:330948 254/565 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594702
Domainoid 1 1.000 391 1.000 Domainoid score I750
eggNOG 1 0.900 - - E1_COG0143
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6009
Inparanoid 1 1.050 461 1.000 Inparanoid score I1535
OMA 1 1.010 - - QHG54021
OrthoDB 1 1.010 - - D334822at33208
OrthoFinder 1 1.000 - - FOG0005001
OrthoInspector 1 1.000 - - oto39190
orthoMCL 1 0.900 - - OOG6_101119
Panther 1 1.100 - - LDO PTHR43326
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1450
SonicParanoid 1 1.000 - - X3534
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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