DRSC/TRiP Functional Genomics Resources

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Protein Alignment MetRS-m and mars1

DIOPT Version :9

Sequence 1:NP_001262564.1 Gene:MetRS-m / 41733 FlyBaseID:FBgn0027083 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_031751853.1 Gene:mars1 / 549754 XenbaseID:XB-GENE-5952509 Length:914 Species:Xenopus tropicalis


Alignment Length:640 Identity:137/640 - (21%)
Similarity:236/640 - (36%) Gaps:160/640 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VTTPIFYVNAAPHIGHLYSAVI-ADAHCRYQRLRYPEQDVRLCTGTDEHGTKIQQAASLHGVPVA 85
            :|:.:.|||..||:|::..:|: ||...||.||| ....:.:| ||||:||..:..|...|:...
 Frog   266 ITSALPYVNNVPHLGNIIGSVLSADVFARYCRLR-NWNTLYIC-GTDEYGTATETKAMEEGLTPQ 328

  Fly    86 KYCDDISQRYREVFRSASIQQDDFIRTTEDRHKRAVANFWRTLHTRGHIYSAAYSGWYCVSDETF 150
            :.||..:..:..:::...|..|.|.|||.........:.:..|..|..:.:.......|.:.:.|
 Frog   329 QICDKYNAVHTAIYQWFDISFDFFGRTTTQHQTTIAQDIFHRLLKRDFLLTDTVEQLRCETCQRF 393

  Fly   151 LTDSQL-------RLDEATGTR------------------------------------------- 165
            |.|..:       ..:||.|.:                                           
 Frog   394 LADRFVEGTCPFCNYEEARGDQCDKCGKLINAVELKKPQCKVCKKSPVKKSSKHLFLDLPKLEKR 458

  Fly   166 ------YSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKTEARVRPAKFEKILLDTLSEPLPDVS 224
                  .|..||   :||....::         .|.|::...:.|                   .
 Frog   459 LEQWLEKSFSSG---DWTSNARFI---------TRSWIRDGLKPR-------------------C 492

  Fly   225 VSRPSNRVHWAIPVPDDD--SQTVYVWLDALVNYLSSVGYPDEKFSAHWPPAQQV-----IGKDI 282
            ::|.   :.|..|||.|.  .:..|||.||.:.|:|......:::...|...|||     :.||.
 Frog   493 ITRD---LKWGTPVPLDGFRDKVFYVWFDAPIGYISITANYTDQWEKWWKSTQQVQLYHFMAKDN 554

  Fly   283 LKFHGIYWTAFLLAAGLEPPGQLYVH----SHWTVDGQKMSKSKH-NVVDPLQAAQQYTMEGLRY 342
            :.||.:.:.:.||  |.|....|..|    .:...:..|.|||:. .|...:........:..|:
 Frog   555 VPFHSVIFPSCLL--GAEDNYTLVNHIIATEYLNYEDGKFSKSRGVGVFGDMAKDTGIPADIWRF 617

  Fly   343 FLLREGVAHSDGNYSHVKAQRILNSELADTLGNLLSRAS---AKSLNPGQIYPSPSAEHLADLLR 404
            :||.......|..:|........||||.:.|||.::||.   .|..| |.:   |..|.|::   
 Frog   618 YLLYVRPEGQDSAFSWSDLMLKNNSELLNNLGNFVNRAGMFVQKFFN-GCV---PEMELLSE--- 675

  Fly   405 SLDVAKRLQDSLLQLSERCESHYECNHFHL----VADTTMAALHAA---NNFFESSKPWTLKAGA 462
                .|||   |.|::...:.:.:    ||    :.|.....|:.:   |.:.:.::||....|.
 Frog   676 ----DKRL---LAQVAAELQQYNQ----HLEKVRIRDALRCILNISRHGNQYIQVNEPWKCIKGN 729

  Fly   463 PDGNQARLETIIAMTMDALRLSGIVLQPIIPQLANRLLDKLSVPTAQRGWNYLAESFATSPNSSN 527
            .. .|.|..|:..:.::...|..::|.|.:|.::..:.::|.:|...:   .|...|.       
 Frog   730 QQ-EQKRAGTVTGVAVNMAALLSVMLHPYMPTVSGLIQEQLLMPQESK---VLTTDFC------- 783

  Fly   528 SPAGLGESRQLDGQTSALLFQRILEETSAKEVKEQ---------KPQPAKRSKSK 573
              ..|....|: |..|. |||: ||....:.::::         ..:|..:::||
 Frog   784 --CRLQSGHQI-GNVSP-LFQK-LENDQIESLRKRFGGGQLNGDNTEPQVKTESK 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRS-mNP_001262564.1 MetRS_core 20..356 CDD:173907 85/402 (21%)
PRK11893 21..553 CDD:237012 133/609 (22%)
Anticodon_Ia_like 365..503 CDD:299868 35/147 (24%)
mars1XP_031751853.1 GST_N_5 1..72 CDD:408278
GST_C_MetRS_N 76..177 CDD:198340
PLN02610 254..>882 CDD:215329 137/640 (21%)
WHEP-TRS 859..913 CDD:214960
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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