DRSC/TRiP Functional Genomics Resources

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Protein Alignment MetRS-m and Y105E8A.20

DIOPT Version :9

Sequence 1:NP_001262564.1 Gene:MetRS-m / 41733 FlyBaseID:FBgn0027083 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001129797.1 Gene:Y105E8A.20 / 173312 WormBaseID:WBGene00013678 Length:524 Species:Caenorhabditis elegans


Alignment Length:523 Identity:209/523 - (39%)
Similarity:320/523 - (61%) Gaps:22/523 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SSHYVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPEQDVRLCTGTDEHGTKIQQAASLHGV 82
            ||.:||:||||.||.|||||.|:||:.|...|:.||::|....:...||||||:||.|||.....
 Worm    11 SSTFVTSPIFYANAEPHIGHAYTAVLCDVAHRWNRLKHPGAQAQFSIGTDEHGSKIFQAALAAKS 75

  Fly    83 PVAKYCDDISQRYREVFRSASIQQDDFIRTTEDRHKRAVANFWRTLHTRGHIYSAAYSGWYCVSD 147
            ...::||.:|.::.::|....:...:|||||:..|..||.:||..:...|:||.:.|||:|.::|
 Worm    76 TPKQFCDRVSSKFSDLFTDLELSHTNFIRTTDPAHLEAVQHFWMKIQDNGYIYKSTYSGYYSITD 140

  Fly   148 ETFLTDSQL--RLDEATGTRYSLES-GHPVEWTEETNYMFRLSQFQDDVRHWVKTE-ARVRPAKF 208
            |.|:.:..:  ::.|....:.:|:| |.||||.||.|||||||:|::.|..|:..| ..|.|:|:
 Worm   141 ECFIPEEDVVKKIVEGGAEKLTLKSNGTPVEWIEEENYMFRLSEFREKVAEWINRENIVVHPSKY 205

  Fly   209 EKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDDSQTVYVWLDALVNYLSSVGYPDEKFSAHWPP 273
            :.:.|.:| |...|:|:||..:|:.|.||||:|.:||:|||||||||||:..|:|:.:  :.|||
 Worm   206 KSLALTSL-EMSEDLSISRSRSRLSWGIPVPNDPTQTIYVWLDALVNYLTVTGFPNAQ--SVWPP 267

  Fly   274 AQQVIGKDILKFHGIYWTAFLLAAGLEPPGQLYVHSHWTVDGQKMSKSKHNVVDPLQAAQQYTME 338
            ..|||||||.|||..||.|||:||||..|.::::|.||.:|..|||||..|||:|.:|..::|.|
 Worm   268 TCQVIGKDITKFHLYYWPAFLMAAGLSLPQKVFIHGHWLIDNVKMSKSLGNVVNPSEAITKFTAE 332

  Fly   339 GLRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNLLSRASAKSLNPGQIYPSPSAEHLADLL 403
            |||||||:.|....|.:::.....:.:||:|.:.:||||:|::.:.:|...:||....|.:...:
 Worm   333 GLRYFLLKHGNPSYDCSFNWNSCLQTINSDLVNNVGNLLNRSTVEKINKEGMYPKMEIEDIEAEI 397

  Fly   404 RSLDVAKRLQDSLLQLSERCESHYECNHFHLVADTTMAALHAANNFFESSKPWTLKAGAPDGNQA 468
            |  :.||:|.:.:.:..|.|...|:...:..:.:..|..:..||..|:||:||      .:.::.
 Worm   398 R--ENAKKLMEMVEESRENCVDLYDEMSYFKIIENLMLTMKEANRLFQSSQPW------KEIDEK 454

  Fly   469 RLETIIAMTMDALRLSGIVLQPIIPQLANRLLDKLSVPTAQRGWNYLAESFATSPNSSNSPAGLG 533
            ||::::.:|.|.:|:..|:||||.|::|...|::|.||..:|       :...|...|.|...||
 Worm   455 RLKSLLFVTYDTIRVVTILLQPITPKMAEFCLNRLGVPKNER-------NLENSRFGSYSGGKLG 512

  Fly   534 ESR 536
            ..|
 Worm   513 AER 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRS-mNP_001262564.1 MetRS_core 20..356 CDD:173907 157/339 (46%)
PRK11893 21..553 CDD:237012 207/520 (40%)
Anticodon_Ia_like 365..503 CDD:299868 40/137 (29%)
Y105E8A.20NP_001129797.1 PRK11893 12..519 CDD:237012 208/522 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 339 1.000 Domainoid score I583
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6009
Inparanoid 1 1.050 401 1.000 Inparanoid score I1091
Isobase 1 0.950 - 0 Normalized mean entropy S1506
OMA 1 1.010 - - QHG54021
OrthoDB 1 1.010 - - D334822at33208
OrthoFinder 1 1.000 - - FOG0005001
OrthoInspector 1 1.000 - - oto17435
orthoMCL 1 0.900 - - OOG6_101119
Panther 1 1.100 - - LDO PTHR43326
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1450
SonicParanoid 1 1.000 - - X3534
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.960

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