DRSC/TRiP Functional Genomics Resources

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Protein Alignment MetRS-m and Aimp1

DIOPT Version :9

Sequence 1:NP_001262564.1 Gene:MetRS-m / 41733 FlyBaseID:FBgn0027083 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_031952.2 Gene:Aimp1 / 13722 MGIID:102774 Length:319 Species:Mus musculus


Alignment Length:131 Identity:32/131 - (24%)
Similarity:49/131 - (37%) Gaps:46/131 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   471 ETIIAMTM---DALRLSGIVLQPIIPQLANRLL------------DKLSVP-----TAQRGWNYL 515
            :.|:..||   ..||:....|:..|.:|...|:            .:||.|     ||       
Mouse    44 KAILQATMREEKKLRVENAKLKKEIEELKQELILAEIHNGVEQVRVRLSTPLQTNCTA------- 101

  Fly   516 AESFATSPN--SSNSPA-----GLGESRQLDGQTSALLFQRILEETSAKEVKEQKPQPAKRSKSK 573
            :||...||:  ::.|||     ..||.:            ::.|:|..|..|::|.|.|..|...
Mouse   102 SESVVQSPSVATTASPATKEQIKAGEEK------------KVKEKTEKKGEKKEKQQSAAASTDS 154

  Fly   574 K 574
            |
Mouse   155 K 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRS-mNP_001262564.1 MetRS_core 20..356 CDD:173907
PRK11893 21..553 CDD:237012 23/108 (21%)
Anticodon_Ia_like 365..503 CDD:299868 9/46 (20%)
Aimp1NP_031952.2 NUDE_C 17..>117 CDD:282704 18/79 (23%)
tRNA_bind_EMAP-II_like 157..259 CDD:239198
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0143
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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