DRSC/TRiP Functional Genomics Resources

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Protein Alignment MetRS-m and mars2

DIOPT Version :9

Sequence 1:NP_001262564.1 Gene:MetRS-m / 41733 FlyBaseID:FBgn0027083 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_002940449.2 Gene:mars2 / 100488527 XenbaseID:XB-GENE-5862162 Length:571 Species:Xenopus tropicalis


Alignment Length:555 Identity:251/555 - (45%)
Similarity:332/555 - (59%) Gaps:45/555 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LGTRYNSSHYVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPEQDVRLCTGTDEHGTKIQQA 76
            :|||   .|..|||||||||:||:||:|||::||...||..:...|.  ||.|||||||.|:|||
 Frog    40 VGTR---PHLYTTPIFYVNASPHLGHVYSALLADVQHRYSAMCGIES--RLSTGTDEHGMKVQQA 99

  Fly    77 ASLHGVPVAKYCDDISQRYREVFRSASIQQDDFIRTTEDRHKRAVANFWRTLHTRGHIYSAAYSG 141
            ||...:....:|..:|.::|.:|....|...||:||||.|||.||:.||.||..||:||...|.|
 Frog   100 ASALSLDPHTFCSSVSLQFRNIFDDLDISYTDFVRTTEPRHKEAVSRFWMTLEERGYIYKGTYEG 164

  Fly   142 WYCVSDETFLTDSQL--RLD-EATGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKTEARV 203
            |||.|||.||::.|.  |:| |....|.||||||.|.|..|.|||||||..:..:.:|::||. |
 Frog   165 WYCTSDEAFLSEGQTAERIDSEGNKIRVSLESGHQVHWVSEENYMFRLSSLRPALLNWLQTEP-V 228

  Fly   204 RPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDDSQTVYVWLDALVNYLSSVGYPDEKFS 268
            .||.|.:::...|.|.|||:||||..:|:.|.||||.|.|..:|||||||||||::.|||:.:. 
 Frog   229 HPAPFLRLVHHWLEEELPDLSVSRQRSRLSWGIPVPSDSSHVIYVWLDALVNYLTAAGYPNLQL- 292

  Fly   269 AHWPPAQQVIGKDILKFHGIYWTAFLLAAGLEPPGQLYVHSHWTVDGQKMSKSKHNVVDPLQAAQ 333
            |.|.|:..::|||||:||.|||.|||:||||.||.:|.||||||.:|.|||||..|||||....:
 Frog   293 APWGPSTHLLGKDILRFHAIYWPAFLIAAGLSPPHKLLVHSHWTSEGTKMSKSLKNVVDPADCIR 357

  Fly   334 QYTMEGLRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNLLSRASAKSLNPGQIYPS----- 393
            :||.:||||:|||.|....|.:::|..|:.:|||||||.||.||:|.:|.::||.|.:|.     
 Frog   358 RYTKDGLRYYLLRHGAPERDCDFTHRTARTLLNSELADALGGLLNRCTAPAINPMQHFPKFHYDS 422

  Fly   394 -PSAEHLADLLRSLDVAKRLQDSLLQLSERCESHYECNHFHLVADTTMAALHAANNFFESSKPWT 457
             |||.|        |..:.:..:|..|....:...:....|...:...|.:..:|.||:|..||.
 Frog   423 FPSAAH--------DQLQGVLANLQNLPAEVDQWVKKFQVHKALECIDACVRRSNAFFQSQAPWK 479

  Fly   458 LKAGAPDGNQARLETIIAMTMDALRLSGIVLQPIIPQLANRLLDKLSVPTAQR---GWNYLAESF 519
            |:.|. :...|..:::|.:|:::|||...:|||.:|.||...|::|.||...|   |..:||   
 Frog   480 LQRGV-EKEAALRDSVIYVTLESLRLYATLLQPAVPGLATAALERLGVPLEMRTLKGNTFLA--- 540

  Fly   520 ATSPNSSNSPAGLGESRQLDGQT----SALLFQRI 550
                      |..|||....|||    ..|||.|:
 Frog   541 ----------ATRGESCYFQGQTLGPEKGLLFPRL 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRS-mNP_001262564.1 MetRS_core 20..356 CDD:173907 181/338 (54%)
PRK11893 21..553 CDD:237012 247/546 (45%)
Anticodon_Ia_like 365..503 CDD:299868 47/143 (33%)
mars2XP_002940449.2 PRK12267 48..>566 CDD:237028 247/544 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 393 1.000 Domainoid score I774
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6009
Inparanoid 1 1.050 453 1.000 Inparanoid score I1561
OMA 1 1.010 - - QHG54021
OrthoDB 1 1.010 - - D334822at33208
OrthoFinder 1 1.000 - - FOG0005001
OrthoInspector 1 1.000 - - oto102532
Panther 1 1.100 - - LDO PTHR43326
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3534
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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