DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9616 and gd

DIOPT Version :9

Sequence 1:NP_650347.2 Gene:CG9616 / 41731 FlyBaseID:FBgn0038214 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_001259479.1 Gene:gd / 32159 FlyBaseID:FBgn0000808 Length:531 Species:Drosophila melanogaster


Alignment Length:157 Identity:35/157 - (22%)
Similarity:61/157 - (38%) Gaps:38/157 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSITLFALLVLC---AGPTLGLLVPQHYCDEHFRYAMKDKQQTYIGIFS--APDEAINSNTVLNW 60
            |.:.|.|:|:||   ....:...:|...|.:.|:|.....:  :.|:.:  :||    .:..|:.
  Fly     1 MRLHLAAILILCIEHVTKAVAQGMPISPCPKVFQYRFDGSE--WFGLMAVRSPD----GHQPLHI 59

  Fly    61 LATFEMQGKRDLFVGSMNTYPNKNEAAINIV-RGMPAEVFVEFLNITNAL-----------PKLT 113
            ..|..|:||       ..||.......|.:: ||       :|.:....|           |||.
  Fly    60 RVTLSMRGK-------PTTYTQNYLGEIELLTRG-------KFTHNAPVLYKIRFPKHHFPPKLL 110

  Fly   114 SLYLNDQLLC-SNEEYPFPKTRITLRH 139
            .:..|:.::| .:.|:....|:|.|.|
  Fly   111 LMSANNHVICFGSGEHSIFMTQIQLEH 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9616NP_650347.2 GD_N 24..128 CDD:292649 23/118 (19%)
gdNP_001259479.1 GD_N 27..124 CDD:292649 23/116 (20%)
Tryp_SPc 257..526 CDD:238113
Tryp_SPc 258..526 CDD:214473
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456041
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.