DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9631 and St14

DIOPT Version :10

Sequence 1:NP_650345.1 Gene:CG9631 / 41729 FlyBaseID:FBgn0027563 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_446087.1 Gene:St14 / 114093 RGDID:69288 Length:855 Species:Rattus norvegicus


Alignment Length:268 Identity:73/268 - (27%)
Similarity:122/268 - (45%) Gaps:38/268 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 ECGVEGFSPLQ--IGGDLVTRGQYPWLAALYE-GVGTATYKCVVSVISKRTVITAAHC-----IY 243
            :||:..|:...  :||.....|::||..:|:. |.|   :.|..|:||...:::||||     |:
  Rat   603 DCGLRSFTKQARVVGGTNADEGEWPWQVSLHALGQG---HLCGASLISPDWLVSAAHCFQDETIF 664

  Fly   244 GKSASQLW-VYLGRHDRNENPENGASLVSVTSVLTPSAYEGNPVPDADVGLLVLTSPMVYTKYIR 307
            ..|...:| .:||..|:::...:|.....:..::|..::..... |.|:.||.|..|..|:..:|
  Rat   665 KYSDHTMWTAFLGLLDQSKRSASGVQEHKLKRIITHPSFNDFTF-DYDIALLELEKPAEYSTVVR 728

  Fly   308 PLCLWGSNMGLPPNEGDTGAVAGWGYDRSA-------QKTRFPKTVSVRLVPRDQCLKEMKRAED 365
            |:||..:....|  .|....|.|||:.:..       ||.      .:|::.:..|.:.:.:.  
  Rat   729 PICLPDNTHVFP--AGKAIWVTGWGHTKEGGTGALILQKG------EIRVINQTTCEELLPQQ-- 783

  Fly   366 FITRRTVCAG-NSESHGPCFGDSGSAL-IVLRNNRWYVRGVVSLSPRHGEIC-DLSKYVIYCDVA 427
             ||.|.:|.| .|.....|.||||..| .|.::.|.:..||||    .||.| ..:|..:|..:.
  Rat   784 -ITPRMMCVGFLSGGVDSCQGDSGGPLSSVEKDGRIFQAGVVS----WGEGCAQRNKPGVYTRIP 843

  Fly   428 RHIDWVRQ 435
            ...||:::
  Rat   844 EVRDWIKE 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9631NP_650345.1 GD_N 26..132 CDD:464985
Tryp_SPc 198..436 CDD:238113 70/255 (27%)
St14NP_446087.1 SEA 88..178 CDD:460188
CUB 214..332 CDD:238001
CUB 340..444 CDD:238001
LDLa 454..486 CDD:238060
LDLa 492..523 CDD:238060
LDLa 525..559 CDD:238060
LDLa 567..602 CDD:238060
Tryp_SPc 615..852 CDD:238113 70/256 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.