DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R1 and Htr5b

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_077371.1 Gene:Htr5b / 79247 RGDID:62388 Length:370 Species:Rattus norvegicus


Alignment Length:350 Identity:115/350 - (32%)
Similarity:178/350 - (50%) Gaps:44/350 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 GEEPEPLSLVSIVVVGIFLSVLIFLSVAGNILVCLAIYTERSLRRIGNLFLASLAIADLFVASLV 181
            |.|| |.|..:::||.: |.:||..:...|:||.:.|...|:..|:.:..:||.|::|:.||:||
  Rat    43 GREP-PFSAFTVLVVTL-LVLLIAATFLWNLLVLVTILRVRAFHRVPHNLVASTAVSDVLVAALV 105

  Fly   182 MTFAGVNDLLG--YWIFGAQFCDTWVAFDVMCSTASILNLCAISMDRYIHIKDPLRYGRWVTRRV 244
            |..:.|::|..  .|..|...|..|::|||:|.||||.|:.||::|||..|...|:|.....||.
  Rat   106 MPLSLVSELSAGRRWQLGRSLCHVWISFDVLCCTASIWNVAAIALDRYWTITRHLQYTLRTRRRA 170

  Fly   245 AVITIAAIWLLAAFVSFVPISLGIHRPDQPLIFEDNGKKYPT----CALDLTPTYAVVSSCISFY 305
            :.:.||..|.|:|.::..|:..|.            |:.|..    |.:...|:|||.|:|.:||
  Rat   171 SALMIAITWALSALIALAPLLFGW------------GEAYDARLQRCQVSQEPSYAVFSTCGAFY 223

  Fly   306 FPCVVMIGIYCRLYCYA-------QKHVKSIKAVTRPGEVAEKQRYKSIRRPKNQPKKFKVR--- 360
            .|..|::.:|.::|..|       ::.|..:.|.|:..|.           |:.....|..|   
  Rat   224 VPLAVVLFVYWKIYKAAKFRFGRRRRAVVPLPATTQAKEA-----------PQESETVFTARCRA 277

  Fly   361 --NLHTHSSPYHVSDHK-AAVTVGVIMGVFLICWVPFFCVNITAAFCKTCIGGQTFKILTWLGYS 422
              ...|....:.....| ||:.||:::|||::||:|||...:.:..|...:......|..|||||
  Rat   278 TVAFQTSGDSWREQKEKRAAMMVGILIGVFVLCWIPFFLTELVSPLCACSLPPIWKSIFLWLGYS 342

  Fly   423 NSAFNPIIYSIFNKEFRDAFKRILT 447
            ||.|||:||:.|||.:.:|||.:.|
  Rat   343 NSFFNPLIYTAFNKNYNNAFKSLFT 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 106/330 (32%)
TM helix 1 130..156 CDD:320193 9/25 (36%)
TM helix 2 163..189 CDD:320193 10/25 (40%)
TM helix 3 201..231 CDD:320193 16/29 (55%)
TM helix 4 243..265 CDD:320193 7/21 (33%)
TM helix 5 292..321 CDD:320193 12/28 (43%)
TM helix 6 371..401 CDD:320193 13/30 (43%)
TM helix 7 410..435 CDD:320193 13/24 (54%)
Htr5bNP_077371.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36
7tmA_5-HT5 63..362 CDD:320451 102/321 (32%)
TM helix 2 87..113 CDD:320451 10/25 (40%)
TM helix 3 127..157 CDD:320451 16/29 (55%)
TM helix 4 169..190 CDD:320451 6/20 (30%)
TM helix 5 210..239 CDD:320451 12/28 (43%)
TM helix 6 291..321 CDD:320451 13/29 (45%)
TM helix 7 330..355 CDD:320451 13/24 (54%)
Blue background indicates that the domain is not in the aligned region.

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