DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R1 and htr2b

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001038208.1 Gene:htr2b / 751784 ZFINID:ZDB-GENE-081022-57 Length:443 Species:Danio rerio


Alignment Length:361 Identity:112/361 - (31%)
Similarity:181/361 - (50%) Gaps:52/361 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 IFLSVLIFLSVAGNILVCLAIYTERSLRRIGNLFLASLAIADLFVASLVMTFAGVNDLL-GYWIF 196
            :.:.::|..::.|||||.||:..||.|:...|.||.|||:|||.|..|||..|.|..|. ..|..
Zfish    19 LLILLVIVPTIGGNILVILAVSLERKLQNATNFFLMSLAVADLLVGLLVMPIALVTVLYNSTWPL 83

  Fly   197 GAQFCDTWVAFDVMCSTASILNLCAISMDRYIHIKDPLRYGRWVTRRVAVITIAAIWLLAAFVSF 261
            ....|..|:..||:.|||||::|||||:||||.||.|:::.::.:|...:..||.:||::..:: 
Zfish    84 ADFLCPIWLFLDVLFSTASIMHLCAISLDRYIAIKKPIQHSQFKSRAKVLAKIALVWLISIGIA- 147

  Fly   262 VPISL-GIHRPDQP-LIFEDNGKKYPTCALDLTP----TYAVVSSCISFYFPCVVMIGIYCRLYC 320
            :||.: |:...|.| :.|..|    .||.  |:|    .:.|..|.::|:.|..:|:.||.....
Zfish   148 IPIPIKGLQFFDHPNITFNKN----HTCL--LSPEGFRDFKVYGSLVAFFIPLAIMMIIYLLTIQ 206

  Fly   321 YAQKHVKSIKA-VTRPGEVAEKQRYKSIRRPKNQPKKFKVRN----------------------- 361
            ..:|....::: ..||......|:..|:..   .|:|..:.|                       
Zfish   207 VLRKKAYLLRSRAARPSISTVFQQELSVLA---SPEKMVISNGIKRDRTLNPVNPITGDEVPLRR 268

  Fly   362 ---LHTHSSPYHVSDHKAAVTVGVIMGVFLICWVPFFCVNITAAFCKTCIGG---QTFKILTWLG 420
               :...|.....::.:|:..:|::..:|::.|.|||..|:|:..|:.|.|.   |...|..|:|
Zfish   269 MSTIGKRSMQNLTNEQRASKVLGIVFMLFVVMWCPFFITNVTSVLCERCNGNLVDQLLDIFQWVG 333

  Fly   421 YSNSAFNPIIYSIFNKEFRDAFKRILT-----MRNP 451
            |.:|..||::|::||:.||.||:|.:|     :|.|
Zfish   334 YVSSGINPLVYTLFNRTFRLAFRRYITCNYKSVRTP 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 106/345 (31%)
TM helix 1 130..156 CDD:320193 8/22 (36%)
TM helix 2 163..189 CDD:320193 15/25 (60%)
TM helix 3 201..231 CDD:320193 18/29 (62%)
TM helix 4 243..265 CDD:320193 5/21 (24%)
TM helix 5 292..321 CDD:320193 8/32 (25%)
TM helix 6 371..401 CDD:320193 8/29 (28%)
TM helix 7 410..435 CDD:320193 9/27 (33%)
htr2bNP_001038208.1 7tm_GPCRs 15..362 CDD:475119 110/352 (31%)
TM helix 1 17..41 CDD:410628 8/21 (38%)
TM helix 2 50..72 CDD:410628 13/21 (62%)
TM helix 3 89..111 CDD:410628 12/21 (57%)
TM helix 4 134..150 CDD:410628 4/16 (25%)
TM helix 5 179..202 CDD:410628 6/22 (27%)
TM helix 6 287..309 CDD:410628 6/21 (29%)
TM helix 7 323..348 CDD:410628 9/24 (38%)

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