DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R1 and hrh2a

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001038803.2 Gene:hrh2a / 735303 ZFINID:ZDB-GENE-070531-4 Length:369 Species:Danio rerio


Alignment Length:440 Identity:143/440 - (32%)
Similarity:208/440 - (47%) Gaps:94/440 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 LVSIVVVGIFLSVLIFLSVAGNILVCLAIYTERSLRRIGNLFLASLAIADLFVASLVMTFAGVND 189
            :.|.:.:.:.|||||.|:|:||||||||:|..|.||.:.|.|:.|||:.|..:.:||:.|:.:..
Zfish     1 MTSQIALAVTLSVLILLTVSGNILVCLAVYATRRLRNVTNCFIVSLAVTDFLLGALVLPFSTLYQ 65

  Fly   190 LLGYWIFGAQFCDTWVAFDVMCSTASILNLCAISMDRYIHIKDPLRYGRWVTR-RVAVITIAAIW 253
            :.|.|..||.||:.:::.|||..|||||||.|||:|||..:..||||...|.. ||..| :|.||
Zfish    66 VTGDWPLGAHFCNIYISLDVMLCTASILNLFAISLDRYFAVTAPLRYPMLVLPWRVGAI-LATIW 129

  Fly   254 LLAAFVSFVPISLGIHRPDQPLIFEDNGKKYPTCALDLTPTYAVVSSCISFYFPCVVMIGIYCRL 318
            |::..||||||.||.:..|..:.....|.....|..:|.||||:|.:..:||.|.:.|...|.|:
Zfish   130 LVSVGVSFVPIHLGWNTRDLSVQNIREGDHARDCRFELNPTYAIVDAFSTFYLPLLAMCWSYHRV 194

  Fly   319 YCYAQKHVKSIKAVTRPGEVAEKQRYKSIRRPKNQPKKFKVRNLHTHSSPYHVSDHKAAVTVGVI 383
            :..|:...|               |..|.||.....:...:..|.         :|||.||:.|:
Zfish   195 FRIARMRAK---------------RIISTRRGSTSSQGVTILTLR---------EHKATVTLAVV 235

  Fly   384 MGVFLICWVPFFCVNITAAFCKTCIG-------GQTFK-ILTWLGYSNSAFNPIIYSIFNKEFRD 440
            :|.|::||.|:|..       .|.:|       .||.: ::.||||:|||.||::|:..|::||.
Zfish   236 LGAFVVCWFPYFTF-------FTIMGIRNEENPPQTAQSVVLWLGYANSALNPVLYATLNRDFRS 293

  Fly   441 AFKRILTMRNPWCCAQDVGNIHPRNSDRFITDYAAKNVVVMNSGRSSAELEQVSAIXPKCCLNLT 505
            |:.::|       |                             |....:.|....|.......:|
Zfish   294 AYAKLL-------C-----------------------------GGRRCKTETTIPIAATAAGTMT 322

  Fly   506 G-----GGATWLPCGCGGLRVDDD---DDGALTTRYVPXDSVTAATATIV 547
            |     .||.:||..|..|:..::   ||.:.|         ..||.|:|
Zfish   323 GHAHSSKGAGFLPRTCVLLKDSENRMLDDNSAT---------NGATVTVV 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 121/320 (38%)
TM helix 1 130..156 CDD:320193 16/25 (64%)
TM helix 2 163..189 CDD:320193 9/25 (36%)
TM helix 3 201..231 CDD:320193 17/29 (59%)
TM helix 4 243..265 CDD:320193 12/21 (57%)
TM helix 5 292..321 CDD:320193 11/28 (39%)
TM helix 6 371..401 CDD:320193 12/29 (41%)
TM helix 7 410..435 CDD:320193 12/25 (48%)
hrh2aNP_001038803.2 7tmA_Histamine_H2R 5..295 CDD:320179 121/321 (38%)
TM helix 1 6..32 CDD:320179 16/25 (64%)
TM helix 2 39..66 CDD:320179 9/26 (35%)
TM helix 3 77..107 CDD:320179 17/29 (59%)
TM helix 4 119..139 CDD:320179 10/20 (50%)
TM helix 5 168..198 CDD:320179 11/29 (38%)
TM helix 6 223..253 CDD:320179 14/45 (31%)
TM helix 7 263..288 CDD:320179 12/24 (50%)

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