DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R1 and 5-HT2B

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:XP_061501050.1 Gene:5-HT2B / 5667641 VectorBaseID:AGAMI1_004218 Length:908 Species:Anopheles gambiae


Alignment Length:904 Identity:152/904 - (16%)
Similarity:233/904 - (25%) Gaps:528/904 - (58%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 ISSSTTIINTSSATTIGGNHTSGS-------TGFSTNSTLLDADHLPLQLTTA--------KVDL 79
            :|.:.|:....:...:|....:|.       ||:.:.....:....|:...|.        ::|.
Mosquito    37 LSGTATVTLAGATVGVGVRGLAGGLVRPPAYTGYVSYMKQFNFTGNPIDNRTGAEAGLGPDRIDA 101

  Fly    80 DIEIDIQLLTNGYDGTTLTSFYNESSWTNASEMDTIVGEEPEPLSLVSIVVVGIFLSVLIFLSVA 144
            |.:.|        ||::| :.:|  .|                 :|::|        :|:|.:.|
Mosquito   102 DDDED--------DGSSL-ALHN--YW-----------------ALLAI--------ILVFGTAA 130

  Fly   145 GNILVCLAIYTERSLRRIGNLFLASLAIADLFVASLVMTFAGVNDLLGYWIFGAQFCDTWVAFDV 209
            |||||||||..||.|:.:.|.||.||||.||.||..||....:..:.|::...:::|..|:..||
Mosquito   131 GNILVCLAIVWERRLQNVTNYFLMSLAITDLMVALSVMPLGILTLVKGHFPLDSEYCLVWICLDV 195

  Fly   210 MCSTASILNLCAISMDRYIHIKDPLRYGRWVTRRVAVITIAAIWLLAAFVSFVPISLGIHRPDQP 274
            :..||||::||.||:|||:.::.|:::||..|||..|:.|:.:|||:..:| :|:|| ::..:..
Mosquito   196 LFCTASIMHLCTISVDRYLSLRYPMKFGRNKTRRRVVLKISFVWLLSIAMS-LPLSL-MYSKNHA 258

  Fly   275 LIFEDNGKKYPTCALDLTPTYAVVSSCISFYFP-CVVMIGIYCRLYCYAQK-------------- 324
            .:..|.     ||.:. .|.|.:|.|.:.||.| ||::|.....:...||:              
Mosquito   259 SVLVDG-----TCQIP-DPVYKLVGSIVCFYIPLCVMLITYTLTVRLLAQQSENLGGVGSGGGWS 317

  Fly   325 ------------------------------HVKS------------------------------I 329
                                          |..|                              :
Mosquito   318 SGWLGQAPAFDRRNTWKRIIKLSLPAAQNPHAHSAASTDTELSTLDNHDLWLLESSIPEPSSITM 382

  Fly   330 KAVTRPGE--------------------------------------------------------- 337
            .|:.|.||                                                         
Mosquito   383 TAMQRFGEEMLKLSQGLESVAQHSDRNSGQNGSSRSPEPSREKESFRKKPANAKHAPTPVTMVTV 447

  Fly   338 ---VAEKQRYKS-----IRRPKNQP-------KKFK----------------------------- 358
               |..|:|..|     .||....|       |:||                             
Mosquito   448 RSPVPSKKRRSSTSTWIARRNSGTPPPVRLVRKRFKSLPHALPPPASDDIEVDEQFMQDVLYELR 512

  Fly   359 ----------------------------------------------VRNLH-------------- 363
                                                          .|..|              
Mosquito   513 DREDRGSVHGSSARPGAAGLDGVPAAASRATSDRREGRDAGSNPAGPRQAHPLAAPSQTAATLKL 577

  Fly   364 ----------------------------------------------------------------- 363
                                                                             
Mosquito   578 PPPCKCPFFGEGAPGRQQYLRPAEIKIVKTSTDFGPMGGAASNGDSLVYSTISISSGSNVTTQPT 642

  Fly   364 --------------------------------------------------------THSSPYHVS 372
                                                                    |.:||..||
Mosquito   643 RSISSSLSTLPASALASPSRKGSAPKGISVVTWDQRRHQRRGSSFGGARTSLLLTPTKASPSSVS 707

  Fly   373 ----------------------------------------------------------------- 372
                                                                             
Mosquito   708 LRRSINLRHSALEGGGGGGGGSAGETMFRGAPKKNSSSPCLMQHQTGGGGGGGAVGGGNGTAVAM 772

  Fly   373 --------------------------------------------DHKAAVTVGVIMGVFLICWVP 393
                                                        :.||...:||:...|:|.|.|
Mosquito   773 MAVAAASSTVPTLATTTMAVRSHHSRNSSMISRNSSRHGRIIRLEQKATKVLGVVFFTFVILWAP 837

  Fly   394 FFCVNITAAFCKTC---IGGQTFKILTWLGYSNSAFNPIIYSIFNKEFRDAFKRILTMR 449
            ||.:|:..:.||.|   |....|:.:|||||::|..|||.|:||||.|||||:::|..|
Mosquito   838 FFVLNLLPSVCKHCEDNIDQWVFEFVTWLGYASSLVNPIFYTIFNKAFRDAFRKVLLCR 896

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 130/780 (17%)
TM helix 1 130..156 CDD:320193 12/25 (48%)
TM helix 2 163..189 CDD:320193 13/25 (52%)
TM helix 3 201..231 CDD:320193 15/29 (52%)
TM helix 4 243..265 CDD:320193 8/21 (38%)
TM helix 5 292..321 CDD:320193 10/29 (34%)
TM helix 6 371..401 CDD:320193 13/138 (9%)
TM helix 7 410..435 CDD:320193 12/24 (50%)
5-HT2BXP_061501050.1 None

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