DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R1 and mAChR-B

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_649764.1 Gene:mAChR-B / 40955 FlyBaseID:FBgn0037546 Length:1019 Species:Drosophila melanogaster


Alignment Length:231 Identity:64/231 - (27%)
Similarity:107/231 - (46%) Gaps:30/231 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 SSWTNASEMDTIVGEEPEPLSLVSIVVVGIFLSVLIFLSVAGNILVCLAIYTERSLRRIGNLFLA 168
            |:.:.:|....|:|....|.:|...:::.|.|::.|.|:|.|||||.||...:|::|:..|.|:|
  Fly   109 STMSGSSSDSEILGPVLPPFALWQTILIAICLAICIILTVGGNILVLLAFIVDRNIRQPSNYFIA 173

  Fly   169 SLAIADLFVASLVMTFAGVNDLLGYWIFGAQFCDTWVAFDVMCSTASILNLCAISMDRYIHIKDP 233
            |||..|:.:.::.|.|..:..|.|||..|...||.|::.|......|...:..|::|||..:|..
  Fly   174 SLAATDMLIGTVSMPFYTIYVLKGYWDLGPMLCDLWLSVDYTVCLVSQYTVLLITIDRYCSVKIA 238

  Fly   234 LRYGRWVTRRVAVITIAAIWLLAAFVSFVPISLGIHRPDQPLIFEDNGKKYPTCALDLTPTYAVV 298
            .:|..|.||...:..:...|::.|.:.|:.|.               |.::.|...||.|....|
  Fly   239 AKYRSWRTRTRVIYMVTITWIIPALLFFISIF---------------GWEHFTGKRDLLPGQCAV 288

  Fly   299 ----------SSCISFYFPCVVMI-----GIYCRLY 319
                      :..|.:|:..::::     |||...|
  Fly   289 QFLKDPIFNTALIIGYYWTTLIVLFVLYAGIYKTAY 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 58/205 (28%)
TM helix 1 130..156 CDD:320193 12/25 (48%)
TM helix 2 163..189 CDD:320193 9/25 (36%)
TM helix 3 201..231 CDD:320193 9/29 (31%)
TM helix 4 243..265 CDD:320193 3/21 (14%)
TM helix 5 292..321 CDD:320193 8/43 (19%)
TM helix 6 371..401 CDD:320193
TM helix 7 410..435 CDD:320193
mAChR-BNP_649764.1 7tmA_mAChR_GAR-2-like 147..>323 CDD:320429 53/190 (28%)
TM helix 2 168..194 CDD:320429 9/25 (36%)
TM helix 3 206..236 CDD:320429 9/29 (31%)
TM helix 4 248..271 CDD:320429 4/37 (11%)
TM helix 5 293..322 CDD:320429 5/28 (18%)
7tm_GPCRs <932..1008 CDD:475119
TM helix 6 941..963 CDD:410628
TM helix 7 976..1001 CDD:410628
Blue background indicates that the domain is not in the aligned region.

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