DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R1 and 5-HT2A

DIOPT Version :9

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_730859.1 Gene:5-HT2A / 40575 FlyBaseID:FBgn0087012 Length:930 Species:Drosophila melanogaster


Alignment Length:676 Identity:142/676 - (21%)
Similarity:209/676 - (30%) Gaps:302/676 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 GNHTSGSTGFSTNSTLLDADHLPL---QLTTAKVDLDIEIDIQLLTNGYDGTTLTSFYNESSWTN 108
            |....|...|...|.|::.||..|   .:|...:|:       .|.|      ||:. |.:|..:
  Fly   213 GAERDGLWSFLNLSELMEPDHGFLGIMNVTNTSLDM-------FLPN------LTAL-NTTSTAS 263

  Fly   109 ASEMDT-------IVGEEPEPLSLVSIVVVGIFLSVLIFLSVAGNILVCLAIYTERSLRRIGNLF 166
            .::|.|       .:...|.....:.:.||     ..||....||||||||:..:|.|:.:.|.|
  Fly   264 TADMATEFAVTKSFLDYSPHGYDFLFLFVV-----FFIFAGGLGNILVCLAVALDRKLQNVTNYF 323

  Fly   167 LASLAIADLFVASLVMTFAGVNDLLGYWIFGAQFCDTWVAFDVMCSTASILNLCAISMDRYIHIK 231
            |.|||||||.|:..||....:...||||..|..:|:.:|..||:..::|||::|.||:.||:.|:
  Fly   324 LFSLAIADLLVSLFVMPMGAIPAFLGYWPLGFTWCNIYVTCDVLACSSSILHMCFISLGRYMGIR 388

  Fly   232 DPLRYGRWVTRRVAVITIAAIWLLAAFVSFVPISLGIHRPDQPLIFEDNGKKYPTCALDLTPTYA 296
            :||......|:|:..|.||.:|::|..||.....||       |:.|.|....|...:.....:.
  Fly   389 NPLGSRHRSTKRLTGIKIAIVWVMAMMVSSSITVLG-------LVNEKNIMPEPNICVINNRAFF 446

  Fly   297 VVSSCISFYFPCVVMIGIYC-------RLYCYAQKHVKSI-------KAVTRP------------ 335
            |..|.::||.|.::|:..|.       :...:|.:|.:|.       :...||            
  Fly   447 VFGSLVAFYIPMLMMVTTYALTIPLLRKKARFAAEHPESELFRRLGGRFTLRPQHSQQQLQMFSS 511

  Fly   336 ---------------------GEVAE------------------KQRYKSIR------------- 348
                                 ||:.|                  :||..|.|             
  Fly   512 FSGSNNKFLSMGDGNRNFNTEGEMEEGGAPSRRSGVEPAERPLMQQRTASSRSMGTVSFRNVVNG 576

  Fly   349 ----------------------------------------------------------------- 348
                                                                             
  Fly   577 TSGAAGSGRRTTGTAHSSFRFSGAGIFRHSSSSPASSCHSTSTSRSSSFWRKHGGYPNLMDRLAI 641

  Fly   349 ----------------------------------------------------------------- 348
                                                                             
  Fly   642 HLRLSLVPPSSHPNRRASVRVTISQPQLGYPTNVGGNGGRTVGATEVGAGGNGSSAGRTSNSSLG 706

  Fly   349 -----------------------------------------RPKNQPKKF----------KVRNL 362
                                                     |.|.:|.||          .:|.|
  Fly   707 GTSLMKIATIQGPILNQSQAAGGNHMVQKVKPTALKPEEPQRNKVRPFKFAFNRVATPTLNLRFL 771

  Fly   363 HTHSSPYHVS------DHKAAVTVGVIMGVFLICWVPFFCVNITAAFCKTC-IGGQTFKILTWLG 420
            :..|....:|      :.||...:|::...|::||.|||.:||..|.|..| :.........|||
  Fly   772 NNRSKRNSLSANAVATEQKATKVLGLVFFTFVLCWSPFFILNIIFAACPECQVPEHVVNTCLWLG 836

  Fly   421 YSNSAFNPIIYSIFNKEFRDAFKRIL 446
            |.:|..|||||:|||:.||.||.|:|
  Fly   837 YVSSTINPIIYTIFNRTFRAAFIRLL 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tm_4 134..>266 CDD:304433 54/131 (41%)
7tm_1 145..431 CDD:278431 108/551 (20%)
5-HT2ANP_730859.1 7tm_4 299..>428 CDD:304433 55/135 (41%)
7tm_1 302..>477 CDD:278431 65/181 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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