DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dop1R1 and 5-HT1B

DIOPT Version :9

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001137708.2 Gene:5-HT1B / 37191 FlyBaseID:FBgn0263116 Length:629 Species:Drosophila melanogaster


Alignment Length:644 Identity:149/644 - (23%)
Similarity:231/644 - (35%) Gaps:255/644 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 AIAAGVGSVAATVATSTTSSISSSTTIINTSSATTIGGNHTSGSTGFSTNSTLLDADHLPLQLTT 74
            |:|||...|.|::.     .|.....::|.|....:.||.|.          |:|        ||
  Fly     8 AMAAGDDDVPASIL-----EIELPAILLNESLFIELNGNLTQ----------LVD--------TT 49

  Fly    75 AKVDLDIEIDIQLLTNGYDGTTLTSFYNESSWTNASEMDTIVGEEPEPLS-----LVSIVVVGIF 134
            :.:. .|..:..:..||                |::..| :|.:|.|..:     ||.::.:.:.
  Fly    50 SNLS-QIVWNRSINGNG----------------NSNTFD-LVDDEQERAAVEFWLLVKMIAMAVV 96

  Fly   135 LSVLIFLSVAGNILVCLAIYTERSLRRIGNLFLASLAIADLFVASLVMTFAGVNDLLGYWIFGAQ 199
            |.::|.:::.||:.|..||..||:|:.:.|..:||||:||||||.|||....|.::...||.|.:
  Fly    97 LGLMILVTIIGNVFVIAAIILERNLQNVANYLVASLAVADLFVACLVMPLGAVYEISNGWILGPE 161

  Fly   200 FCDTWVAFDVMCSTASILNLCAISMDRYIHIKDPLRYGRWVTRRVAVITIAAIWLLAAFVSFVPI 264
            .||.|.:.||:|.|||||:|.||:.|||..:.: :.|....|.|...:.|..:|..|..||..| 
  Fly   162 LCDIWTSCDVLCCTASILHLVAIAADRYWTVTN-IDYNNLRTPRRVFLMIFCVWFAALIVSLAP- 224

  Fly   265 SLGIHRPDQPLIFEDNGKKYPTCALDLTPTYAVVSSCISFYFPCVVMIGIYCRLYCYAQKHV--- 326
            ..|...||.....|:.     .|.:.....|.:.::|.:||.|.:|::.:|.::|..|:|.:   
  Fly   225 QFGWKDPDYMKRIEEQ-----HCMVSQDVGYQIFATCCTFYVPLLVILFLYWKIYIIARKRIQRR 284

  Fly   327 --KSIKAVTRPGE----VAEKQRYKSIRRPKNQ-----------------------PKKFKV--- 359
              ||........:    |.|.::.:|.||.:.:                       .|:.::   
  Fly   285 AQKSFNVTLTETDCDSAVRELKKERSKRRAERKRLEAGERTPVDGDGTGGQLQRRTRKRMRICFG 349

  Fly   360 RNLHT------------------------------------------------------------ 364
            ||.:|                                                            
  Fly   350 RNTNTANVVAGSEGAVARSMAAIAVDFASLAITREETEFSTSNYDNKSHAGTELTTVSSDADDYR 414

  Fly   365 ---------------HSSPYH-VSDH--------------------------------------- 374
                           |::.:| ::.|                                       
  Fly   415 TSNANEIITLSQQVAHATQHHLIASHLNAITPLAQSIAMGGVGCLTTTTPSEKALSGAGTVAGAV 479

  Fly   375 ---------------------------------------------------KAAVTVGVIMGVFL 388
                                                               |||.|:.:|.|.|:
  Fly   480 AGGSGSGSGEEGAGTEGKNAGVGLGGVLASIANPHQKLAKRRQLLEAKRERKAAQTLAIITGAFV 544

  Fly   389 ICWVPFFCVNITAAFCKTC-IGGQTFKILTWLGYSNSAFNPIIYSIFNKEFRDAFKRIL 446
            |||:|||.:.:|.:.||.| |......:..||||.||..||:||:|||.|||.||||||
  Fly   545 ICWLPFFVMALTMSLCKECEIHTAVASLFLWLGYFNSTLNPVIYTIFNPEFRRAFKRIL 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tm_4 134..>266 CDD:304433 54/131 (41%)
7tm_1 145..431 CDD:278431 107/487 (22%)
5-HT1BNP_001137708.2 7tm_1 107..>288 CDD:278431 67/187 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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