DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R1 and htr5ab

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001007122.1 Gene:htr5ab / 368475 ZFINID:ZDB-GENE-030616-574 Length:346 Species:Danio rerio


Alignment Length:339 Identity:110/339 - (32%)
Similarity:181/339 - (53%) Gaps:33/339 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 PLSLVSIVVVGIFLSVLIFLSVAGNILVCLAIYTERSLRRIGNLFLASLAIADLFVASLVMTFAG 186
            |.|:.|::.:.: |::|:..:...|:||.:.|...|:..|:.:..:||:||:|:.||.|||..:.
Zfish    25 PFSVFSVLTLTL-LAMLVVATFVWNLLVLVTILRVRTFHRVPHNLVASMAISDVMVAGLVMPLSL 88

  Fly   187 VNDLLG-YWIFGAQFCDTWVAFDVMCSTASILNLCAISMDRYIHIKDPLRYGRWVTRRVAVITIA 250
            |.:|.| .||.|...|..|::.||:|.||||.|:.||::|||..|...|.|.....:|::.:.|.
Zfish    89 VRELYGRRWILGRALCQVWISCDVLCCTASIWNVTAIALDRYWSITRHLEYTLKTRKRISNVMIG 153

  Fly   251 AIWLLAAFVSFVPISLGIHRPDQPLIFEDNGKKYP----TCALDLTPTYAVVSSCISFYFPCVVM 311
            ..|||::.:|..|: .|.            |:.|.    .|.:...|:|.|.|:..:||.|..|:
Zfish   154 LTWLLSSVISLSPL-FGW------------GETYSEDSLACQVSQEPSYTVFSTFGAFYLPLCVV 205

  Fly   312 IGIYCRLYCYAQKHVKSIK--AVTRPGEVAEKQRYKSIRRPKNQPK-KFKVR----NLHTHSSPY 369
            :.:|.::|..|:..:.|.|  .:|...||.|      ::..:.||: .|.||    :..|....:
Zfish   206 LFVYWKIYKAAKFRIGSRKTNTITPMAEVIE------VKEAERQPQMAFTVRHATVSFQTDGETW 264

  Fly   370 -HVSDHKAAVTVGVIMGVFLICWVPFFCVNITAAFCKTCIGGQTFKILTWLGYSNSAFNPIIYSI 433
             ...:.:||:.||:::|||::||:|||...:....|...|......:..|||||||.|||:||:.
Zfish   265 REQKERRAALMVGILIGVFVLCWIPFFLAELIIPLCSCDIPPVWKSVFLWLGYSNSFFNPLIYTA 329

  Fly   434 FNKEFRDAFKRILT 447
            |||.:.:||:.:.:
Zfish   330 FNKNYNNAFRNLFS 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 105/324 (32%)
TM helix 1 130..156 CDD:320193 6/25 (24%)
TM helix 2 163..189 CDD:320193 11/25 (44%)
TM helix 3 201..231 CDD:320193 15/29 (52%)
TM helix 4 243..265 CDD:320193 7/21 (33%)
TM helix 5 292..321 CDD:320193 10/28 (36%)
TM helix 6 371..401 CDD:320193 12/29 (41%)
TM helix 7 410..435 CDD:320193 12/24 (50%)
htr5abNP_001007122.1 7tmA_5-HT5 31..338 CDD:320451 105/326 (32%)
TM helix 1 32..58 CDD:320451 6/26 (23%)
TM helix 2 65..91 CDD:320451 11/25 (44%)
TM helix 3 104..134 CDD:320451 15/29 (52%)
TM helix 4 146..167 CDD:320451 6/20 (30%)
TM helix 5 186..215 CDD:320451 10/28 (36%)
TM helix 6 267..297 CDD:320451 12/29 (41%)
TM helix 7 306..331 CDD:320451 12/24 (50%)

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