DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R1 and HTR6

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_000862.1 Gene:HTR6 / 3362 HGNCID:5301 Length:440 Species:Homo sapiens


Alignment Length:442 Identity:147/442 - (33%)
Similarity:209/442 - (47%) Gaps:57/442 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 VGIFLSVLIFLSVAGNILVCLAIYTERSLRRIGNLFLASLAIADLFVASLVMTFAGVNDLLGYWI 195
            |...|.|:|.|:.|.|.|:...|.|:.:||...|.||.||..:||.|..:||..|.:|.|.|.|:
Human    29 VAAALCVVIALTAAANSLLIALICTQPALRNTSNFFLVSLFTSDLMVGLVVMPPAMLNALYGRWV 93

  Fly   196 FGAQFCDTWVAFDVMCSTASILNLCAISMDRYIHIKDPLRYGRWVTRRVAVITIAAIWLLAAFVS 260
            .....|..|.||||||.:|||||||.||:|||:.|..||||...:|...|:..:...|.|||..|
Human    94 LARGLCLLWTAFDVMCCSASILNLCLISLDRYLLILSPLRYKLRMTPLRALALVLGAWSLAALAS 158

  Fly   261 FVPISLGIH-----RPDQPLIFEDNGKKYPTCALDLTPTYAVVSSCISFYFPCVVMIGIYCRLYC 320
            |:|:.||.|     ||..|      |:    |.|..:..:.:|:|.::|:.|...:...|||:..
Human   159 FLPLLLGWHELGHARPPVP------GQ----CRLLASLPFVLVASGLTFFLPSGAICFTYCRILL 213

  Fly   321 YAQKHVKSIKAVTRPGEVAEKQRYKSIRRPKNQPKKFKVRNLHTHSSPYHVSDHKAAVTVGVIMG 385
            .|:|....:.::|........:..:..|.|:...:....|.|.|..|...:   ||::|:|:::|
Human   214 AARKQAVQVASLTTGMASQASETLQVPRTPRPGVESADSRRLATKHSRKAL---KASLTLGILLG 275

  Fly   386 VFLICWVPFFCVNITAAFCKTCIGGQTFKILTWLGYSNSAFNPIIYSIFNKEFRDAFKRILTMRN 450
            :|.:.|:|||..||..|.| .||....|.:||||||.||..|||||.:|.::|:.|..|.|..  
Human   276 MFFVTWLPFFVANIVQAVC-DCISPGLFDVLTWLGYCNSTMNPIIYPLFMRDFKRALGRFLPC-- 337

  Fly   451 PWCCAQDVGNIHPRNSDRFITDYAAKNVVVMNSG-RSSAELEQV--SAIXPKCCLNLTGGGATWL 512
            |.|         ||...   ...|:.::...:|| |....|:||  ..:.|....:...|..   
Human   338 PRC---------PRERQ---ASLASPSLRTSHSGPRPGLSLQQVLPLPLPPDSDSDSDAGSG--- 387

  Fly   513 PCGCGGLRV--------DDDDDGALTTRYVPXDSVTAATATIVETVEAAQME 556
              |..|||:        :...|..|.||        ||.|.....::.|:.|
Human   388 --GSSGLRLTAQLLLPGEATQDPPLPTR--------AAAAVNFFNIDPAEPE 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 118/315 (37%)
TM helix 1 130..156 CDD:320193 9/24 (38%)
TM helix 2 163..189 CDD:320193 11/25 (44%)
TM helix 3 201..231 CDD:320193 20/29 (69%)
TM helix 4 243..265 CDD:320193 8/21 (38%)
TM helix 5 292..321 CDD:320193 7/28 (25%)
TM helix 6 371..401 CDD:320193 12/29 (41%)
TM helix 7 410..435 CDD:320193 14/24 (58%)
HTR6NP_000862.1 7tmA_5-HT6 27..331 CDD:320182 118/315 (37%)
TM helix 1 28..54 CDD:320182 9/24 (38%)
TM helix 2 61..87 CDD:320182 11/25 (44%)
TM helix 3 99..129 CDD:320182 20/29 (69%)
TM helix 4 141..164 CDD:320182 8/22 (36%)
TM helix 5 185..214 CDD:320182 7/28 (25%)
TM helix 6 261..291 CDD:320182 12/32 (38%)
TM helix 7 299..324 CDD:320182 14/24 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 346..392 10/50 (20%)

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