DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R1 and HTR4

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001035263.1 Gene:HTR4 / 3360 HGNCID:5299 Length:428 Species:Homo sapiens


Alignment Length:382 Identity:131/382 - (34%)
Similarity:192/382 - (50%) Gaps:39/382 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 EMDTIVGEEPEPLSLVSIVVVGIFLSVLIFLSVAGNILVCLAIYTERSLRRI-GNLFLASLAIAD 174
            ::|..|..| |....|..||:..|||.:|.:::.||:||.:|:..:|.||:| .|.|:.|||.||
Human     3 KLDANVSSE-EGFGSVEKVVLLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFAD 66

  Fly   175 LFVASLVMTFAGVNDLLGYWIFGAQFCDTWVAFDVMCSTASILNLCAISMDRYIHI-KDPLRYGR 238
            |.|:.|||.|..:..:...||:|..||....:.||:.:||||.:||.||:|||..| ..||.|..
Human    67 LLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRN 131

  Fly   239 WVTRRVAVITIAAIWLLAAFVSFVPI-----SLGIHRPDQPLIFEDNGKKYPTCALDLTPTYAVV 298
            .:|.....:.:...|::..|:||:||     ::||....:...|..|... ..|...:...||:.
Human   132 KMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKRKFNQNSNS-TYCVFMVNKPYAIT 195

  Fly   299 SSCISFYFPCVVMIGIYCRLYCYAQKHVKSIKAVTRPGEVAEKQRYKSIRRPKNQPKKFKVRNLH 363
            .|.::||.|.::|:..|.|:|..|::|...|:.:.|.|..:|.       ||::..:        
Human   196 CSVVAFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSES-------RPQSADQ-------- 245

  Fly   364 THSSPYHVSDHKAAVTVGVIMGVFLICWVPFFCVNITAAFCKTCIGGQTFKILTWLGYSNSAFNP 428
             ||:....::.|||.|:.:|||.|.:||.|||..||...|....:.||.:....||||.||..||
Human   246 -HSTHRMRTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWLGYINSGLNP 309

  Fly   429 IIYSIFNKEFRDAFKRIL-----TMRNPWCCAQDV--------GNIHPRNSDRFITD 472
            .:|:..||.||.||..||     ..|.|....|.|        |:.|...:| |:.|
Human   310 FLYAFLNKSFRRAFLIILCCDDERYRRPSILGQTVPCSTTTINGSTHVLRTD-FLFD 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 112/318 (35%)
TM helix 1 130..156 CDD:320193 10/25 (40%)
TM helix 2 163..189 CDD:320193 13/25 (52%)
TM helix 3 201..231 CDD:320193 15/30 (50%)
TM helix 4 243..265 CDD:320193 6/26 (23%)
TM helix 5 292..321 CDD:320193 10/28 (36%)
TM helix 6 371..401 CDD:320193 15/29 (52%)
TM helix 7 410..435 CDD:320193 11/24 (46%)
HTR4NP_001035263.1 7tmA_5-HT4 20..323 CDD:320184 113/319 (35%)
TM helix 1 21..47 CDD:320184 10/25 (40%)
TM helix 2 55..81 CDD:320184 13/25 (52%)
TM helix 3 93..123 CDD:320184 14/29 (48%)
TM helix 4 136..159 CDD:320184 6/22 (27%)
TM helix 5 189..218 CDD:320184 10/28 (36%)
TM helix 6 252..282 CDD:320184 15/29 (52%)
TM helix 7 291..316 CDD:320184 11/24 (46%)

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