DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R1 and HTR1F

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_000857.1 Gene:HTR1F / 3355 HGNCID:5292 Length:366 Species:Homo sapiens


Alignment Length:387 Identity:122/387 - (31%)
Similarity:184/387 - (47%) Gaps:61/387 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 FYNESSWTNASEMDTIVGEEPEPLSLVSIVVVGIFLSVLIFLSVAGNILVCLAIYTERSLRRIGN 164
            |.|.|.....||  .::...|      |.::|.:.||.|..::...|.||..||...|.|....|
Human     3 FLNSSDQNLTSE--ELLNRMP------SKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPAN 59

  Fly   165 LFLASLAIADLFVASLVMTFAGVNDLLGYWIFGAQFCDTWVAFDVMCSTASILNLCAISMDRYIH 229
            ..:.|||:.|..||.|||.|:.|..:...||.|...||.|::.|:.|.|.|||:|.||::|||..
Human    60 YLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRA 124

  Fly   230 IKDPLRYGRWVTRRVAVITIAAIWLLAAFVSFVPI---SLGIHRPDQPLIFEDNGKKYPTCALDL 291
            |.|.:.|.|..|.:.|.|.|..:|:::.|:|..|:   ..|..|.|:.:|..|:           
Human   125 ITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLFWRHQGTSRDDECIIKHDH----------- 178

  Fly   292 TPTYAVVSSCIS----FYFPCVVMIGIYCRLY-----CYAQKHVKSI-------KAVTRPGEVAE 340
                 :||:..|    ||.|..:::.:|.::|     .|.::....|       :.:...||.:.
Human   179 -----IVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEEVNGQVLLESGEKST 238

  Fly   341 KQ---RY---KSIRRPKNQPKKF--KVRNLHT---HSSPYH------VSDHKAAVTVGVIMGVFL 388
            |.   .|   ||:..|.....|.  .||:|.:   |...:.      ..:.|||.|:|:|:|.|:
Human   239 KSVSTSYVLEKSLSDPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKAATTLGLILGAFV 303

  Fly   389 ICWVPFFCVNITAAFCKTC-IGGQTFKILTWLGYSNSAFNPIIYSIFNKEFRDAFKRILTMR 449
            |||:|||...:....|..| |..:....|.||||.||..||:||:|||::|:.||::::..|
Human   304 ICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCR 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 112/348 (32%)
TM helix 1 130..156 CDD:320193 9/25 (36%)
TM helix 2 163..189 CDD:320193 12/25 (48%)
TM helix 3 201..231 CDD:320193 15/29 (52%)
TM helix 4 243..265 CDD:320193 7/24 (29%)
TM helix 5 292..321 CDD:320193 8/37 (22%)
TM helix 6 371..401 CDD:320193 14/29 (48%)
TM helix 7 410..435 CDD:320193 12/24 (50%)
HTR1FNP_000857.1 7tmA_5-HT1F 24..359 CDD:320456 113/350 (32%)
TM helix 1 25..51 CDD:320456 9/25 (36%)
TM helix 2 58..84 CDD:320456 12/25 (48%)
TM helix 3 96..126 CDD:320456 15/29 (52%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250|UniProtKB:P41595 120..122 1/1 (100%)
TM helix 4 138..160 CDD:320456 7/21 (33%)
TM helix 5 178..207 CDD:320456 8/44 (18%)
TM helix 6 286..316 CDD:320456 14/29 (48%)
TM helix 7 326..351 CDD:320456 12/24 (50%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 343..347 2/3 (67%)

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