DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dop1R1 and HTR1B

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_000854.1 Gene:HTR1B / 3351 HGNCID:5287 Length:390 Species:Homo sapiens


Alignment Length:378 Identity:110/378 - (29%)
Similarity:178/378 - (47%) Gaps:58/378 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 NASEMDTIVGEEPEPLSLVSIVVVGIFLSVLIFLSVAGNILVCLAIYTERSLRRIGNLFLASLAI 172
            |.|..|.|.   .:.:||...|::.:.|:::...:...|..|...:|..|.|....|..:||||:
Human    32 NCSAKDYIY---QDSISLPWKVLLVMLLALITLATTLSNAFVIATVYRTRKLHTPANYLIASLAV 93

  Fly   173 ADLFVASLVMTFAGVNDLLGYWIFGAQFCDTWVAFDVMCSTASILNLCAISMDRYIHIKDPLRYG 237
            .||.|:.|||..:.:..:.|.|..|...||.|::.|:.|.|||||:||.|::|||..|.|.:.|.
Human    94 TDLLVSILVMPISTMYTVTGRWTLGQVVCDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYS 158

  Fly   238 RWVTRRVAVITIAAIWLLAAFVSFVPISLGIHRPDQPLIFEDNGKKYPTCALDLTP-TYAVVSSC 301
            ...|.:.|.:.||.:|:.:..:|..|......:.::         :...|.::... .|.|.|:.
Human   159 AKRTPKRAAVMIALVWVFSISISLPPFFWRQAKAEE---------EVSECVVNTDHILYTVYSTV 214

  Fly   302 ISFYFPCVVMIGIYCRLYCYAQKHV------KSIKAVTR-------PGEVAE----KQRYKSIRR 349
            .:||||.:::|.:|.|:|..|:..:      ::.|.:||       ||..:.    ..|...:..
Human   215 GAFYFPTLLLIALYGRIYVEARSRILKQTPNRTGKRLTRAQLITDSPGSTSSVTSINSRVPDVPS 279

  Fly   350 PKNQP---KKFKVRNLHTHSSPYHVSD-------------HKAAVTVGVIMGVFLICWVPFFCVN 398
            ....|   .:.|||          |||             .||..|:|:|:|.|::||:|||.::
Human   280 ESGSPVYVNQVKVR----------VSDALLEKKKLMAARERKATKTLGIILGAFIVCWLPFFIIS 334

  Fly   399 ITAAFCKTCIGGQ--TFKILTWLGYSNSAFNPIIYSIFNKEFRDAFKRILTMR 449
            :....||......  .|...|||||.||..|||||::.|::|:.||.:::..:
Human   335 LVMPICKDACWFHLAIFDFFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFK 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 101/347 (29%)
TM helix 1 130..156 CDD:320193 4/25 (16%)
TM helix 2 163..189 CDD:320193 11/25 (44%)
TM helix 3 201..231 CDD:320193 16/29 (55%)
TM helix 4 243..265 CDD:320193 6/21 (29%)
TM helix 5 292..321 CDD:320193 11/29 (38%)
TM helix 6 371..401 CDD:320193 15/42 (36%)
TM helix 7 410..435 CDD:320193 13/26 (50%)
HTR1BNP_000854.1 7tmA_5-HT1B_1D 46..380 CDD:320455 103/352 (29%)
TM helix 1 51..77 CDD:320455 4/25 (16%)
TM helix 2 84..110 CDD:320455 11/25 (44%)
TM helix 3 122..152 CDD:320455 16/29 (55%)
DRY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 146..148 1/1 (100%)
TM helix 4 164..187 CDD:320455 6/22 (27%)
TM helix 5 205..234 CDD:320455 11/28 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..281 3/21 (14%)
TM helix 6 307..337 CDD:320455 12/29 (41%)
TM helix 7 348..373 CDD:320455 13/24 (54%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 365..369 3/3 (100%)

Return to query results.
Submit another query.