DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R1 and HTR1A

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_000515.2 Gene:HTR1A / 3350 HGNCID:5286 Length:422 Species:Homo sapiens


Alignment Length:396 Identity:124/396 - (31%)
Similarity:185/396 - (46%) Gaps:95/396 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 VVVGIFLSVLIFLSVAGNILVCLAIYTERSLRRIGNLFLASLAIADLFVASLVMTFAGVNDLLGY 193
            |:..:.|..|||.:|.||..|..||..||||:.:.|..:.|||:.||.|:.||:..|.:..:|..
Human    37 VITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNK 101

  Fly   194 WIFGAQFCDTWVAFDVMCSTASILNLCAISMDRYIHIKDPLRYGRWVTRRVAVITIAAIWLLAAF 258
            |..|...||.::|.||:|.|:|||:||||::|||..|.||:.|....|.|.|...|:..||:...
Human   102 WTLGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISLTWLIGFL 166

  Fly   259 VSFVPISLGIHRPDQPLIFEDNGKKYPTCALDLTPTYAVVSSCISFYFPCVVMIGIYCRLYCYAQ 323
            :| :|..||...|      ||.... ..|.:.....|.:.|:..:||.|.::|:.:|.|::..|:
Human   167 IS-IPPMLGWRTP------EDRSDP-DACTISKDHGYTIYSTFGAFYIPLLLMLVLYGRIFRAAR 223

  Fly   324 KHV-KSIKAVTRPGEVAEKQRYKSIRRPKNQPKK------------------------------- 356
            ..: |::|.|.:.|  |:.:...|   |..||||                               
Human   224 FRIRKTVKKVEKTG--ADTRHGAS---PAPQPKKSVNGESGSRNWRLGVESKAGGALCANGAVRQ 283

  Fly   357 ------FKVRNLH-THSSPYHV---------------------------------SDHKAAVTVG 381
                  .:|..:| ..:|..|:                                 .:.|...|:|
Human   284 GDDGAALEVIEVHRVGNSKEHLPLPSEAGPTPCAPASFERKNERNAEAKRKMALARERKTVKTLG 348

  Fly   382 VIMGVFLICWVPFFCVNITAAFCK------TCIGGQTFKILTWLGYSNSAFNPIIYSIFNKEFRD 440
            :|||.|::||:|||.|.:...||:      |.:|.    |:.|||||||..||:||:.|||:|::
Human   349 IIMGTFILCWLPFFIVALVLPFCESSCHMPTLLGA----IINWLGYSNSLLNPVIYAYFNKDFQN 409

  Fly   441 AFKRIL 446
            |||:|:
Human   410 AFKKII 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 119/389 (31%)
TM helix 1 130..156 CDD:320193 10/25 (40%)
TM helix 2 163..189 CDD:320193 10/25 (40%)
TM helix 3 201..231 CDD:320193 17/29 (59%)
TM helix 4 243..265 CDD:320193 7/21 (33%)
TM helix 5 292..321 CDD:320193 8/28 (29%)
TM helix 6 371..401 CDD:320193 13/62 (21%)
TM helix 7 410..435 CDD:320193 12/24 (50%)
HTR1ANP_000515.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
7tmA_5-HT1A_vertebrates 37..411 CDD:320453 120/390 (31%)
TM helix 1 38..64 CDD:320453 10/25 (40%)
TM helix 2 71..97 CDD:320453 10/25 (40%)
TM helix 3 109..139 CDD:320453 17/29 (59%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250|UniProtKB:P41595 133..135 1/1 (100%)
TM helix 4 151..173 CDD:320453 7/22 (32%)
TM helix 5 192..221 CDD:320453 8/28 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 235..262 8/31 (26%)
TM helix 6 338..368 CDD:320453 13/29 (45%)
TM helix 7 379..404 CDD:320453 14/28 (50%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 396..400 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.

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