DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R1 and ser-2

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001024339.1 Gene:ser-2 / 182110 WormBaseID:WBGene00004777 Length:455 Species:Caenorhabditis elegans


Alignment Length:398 Identity:117/398 - (29%)
Similarity:189/398 - (47%) Gaps:79/398 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 PEPLSLVSIVVVGIFLSVLIFLSVAGNILVCLAIYTERSLRRIGNLFLASLAIADLFVASLVMTF 184
            |..:..|.:|:..|...|:|.::|.||.||.:|:::.|.|:::.|.||.|||.:||.||..||..
 Worm    49 PSIIPTVELVLGTITYLVIIAMTVVGNTLVVVAVFSYRPLKKVQNYFLVSLAASDLAVAIFVMPL 113

  Fly   185 AGVNDLL-GYWIFGAQFCDTWVAFDVMCSTASILNLCAISMDRYIHIKDPLRYGRWVTRRVAVIT 248
            ..|..|. |.|:.|...|..:...|::..|:||||||||::|||..|.:|:.|.:..|.:...|.
 Worm   114 HVVTFLAGGKWLLGVTVCQFFTTADILLCTSSILNLCAIALDRYWAIHNPINYAQKRTTKFVCIV 178

  Fly   249 IAAIWLLAAFVSFVPISLGIHRPDQPLIFEDNGKKYPTCALDLTPTYAVVSSCISFYFPCVVMIG 313
            |..:|:|:..:|..|| :|.:...:.:: ||      :|.|.....:.|.|:..||:.|.:||:.
 Worm   179 IVIVWILSMLISVPPI-IGWNNWQENMM-ED------SCGLSTEKAFVVFSAAGSFFLPLLVMVV 235

  Fly   314 IYCRLYCYAQKHVK----------------------------SIKAVTRPGEVAEK--------- 341
            :|.:::..|::.::                            |:::......|.||         
 Worm   236 VYVKIFISARQRIRTNRGRSALMRIQNAEGDDDYRKMSIKRASVESARTSSRVGEKTPLVIADGQ 300

  Fly   342 -------------------QRYKSIRRPKNQPKKFKVRNL---HTHSSPYHV----------SDH 374
                               :..|.::...|...|.||:::   ..:.:|..|          .:.
 Worm   301 TTVTTLAAHSTDGGSLPKDETTKHMKYHNNGSCKVKVKDVKEDEGNPNPTAVLRKREKISVAKEK 365

  Fly   375 KAAVTVGVIMGVFLICWVPFFCVNITAAFCKTC-IGGQTFKILTWLGYSNSAFNPIIYSIFNKEF 438
            :||.|:.||:.||..||:|||...:...||:|| :..:..:..|||||.||:.||.:|.|.|.||
 Worm   366 RAAKTIAVIIFVFSFCWLPFFVAYVIRPFCETCKLHAKVEQAFTWLGYINSSLNPFLYGILNLEF 430

  Fly   439 RDAFKRIL 446
            |.|||:||
 Worm   431 RRAFKKIL 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 109/382 (29%)
TM helix 1 130..156 CDD:320193 9/25 (36%)
TM helix 2 163..189 CDD:320193 13/25 (52%)
TM helix 3 201..231 CDD:320193 14/29 (48%)
TM helix 4 243..265 CDD:320193 6/21 (29%)
TM helix 5 292..321 CDD:320193 8/28 (29%)
TM helix 6 371..401 CDD:320193 13/39 (33%)
TM helix 7 410..435 CDD:320193 11/24 (46%)
ser-2NP_001024339.1 7tmA_tyramine_octopamine_R-like 58..434 CDD:320188 110/383 (29%)
TM helix 1 59..85 CDD:320188 9/25 (36%)
TM helix 2 92..118 CDD:320188 13/25 (52%)
TM helix 3 131..161 CDD:320188 14/29 (48%)
TM helix 4 173..196 CDD:320188 7/23 (30%)
TM helix 5 214..243 CDD:320188 8/28 (29%)
TM helix 6 362..392 CDD:320188 12/29 (41%)
TM helix 7 402..427 CDD:320188 11/24 (46%)

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