DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dop1R1 and tyra-2

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001033537.1 Gene:tyra-2 / 180970 WormBaseID:WBGene00017157 Length:468 Species:Caenorhabditis elegans


Alignment Length:441 Identity:114/441 - (25%)
Similarity:186/441 - (42%) Gaps:124/441 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 VVVGIFLSVLIFLSVAGNILVCLAIYTERSLRRIGNLFLASLAIADLFVASLVMTFAGVNDLLGY 193
            ::.|..|.:|:..::..|.||.:.:|....|:.:.||.:.:||.:||.:..:|:..:.|..:.|.
 Worm    19 ILKGSALFLLVLWTIFANSLVFIVLYKNPRLQTVPNLLVGNLAFSDLALGLIVLPLSSVYAIAGE 83

  Fly   194 WIFGAQFCDTWVAFDVMCSTASILNLCAISMDRYIHIKDPLRYGRWVTRRVAVITIAAIWLLAAF 258
            |:|....|:.:|:.|::||||||.||..:.:|||..|..|:.|.....:|.|.|.|.::|:.:|.
 Worm    84 WVFPDALCEVFVSADILCSTASIWNLSIVGLDRYWAITSPVAYMSKRNKRTAGIMILSVWISSAL 148

  Fly   259 VSFVPISLGIHRPDQP--LIFEDNGKKYPTCALDLTPTYAVVSSCISFYFPCVVMIGIYCRLY-- 319
            :|..|: ||..:..|.  ||:|.|........||| |:|.|.|:..||:.|.::|..:|.::|  
 Worm   149 ISLAPL-LGWKQTAQTPNLIYEKNNTVRQCTFLDL-PSYTVYSATGSFFIPTLLMFFVYFKIYQA 211

  Fly   320 --------CYAQ----------KHVKS-------------------------------------- 328
                    .|.|          ||::|                                      
 Worm   212 FAKHRARQIYRQKLAVSSHVIRKHIESTILHEISHVLPTSDEFAKEEEEEEDSESSGQVENGLGN 276

  Fly   329 -----------------------------IKAVTRPGEVAEKQR--------------------- 343
                                         ...||.|.|....:|                     
 Worm   277 GNDAIIEEDECEDEDSDEKRDDHTSMTTVTATVTGPTEAPYMKREAKISKSVPIEKESAIQKREA 341

  Fly   344 ----------YKSIRRPKNQPKKFKVRNLHTHSSPYHVSDHKAAVTV-GVIMGVFLICWVPFFCV 397
                      |:.::|.||:.::...::|.........:..:..|.| |:|:|.|.:||.|||.:
 Worm   342 KPMRSVMAISYEKVKRHKNRKERIYRKSLQRKPKAISAAKERRGVKVLGIILGCFTVCWAPFFTM 406

  Fly   398 NITAAFCKTCIGGQTFKI-LTWLGYSNSAFNPIIYSIFNKEFRDAFKRILT 447
            .:...|||.|......:: :|||||||||.|||||::||::::.|.||:.|
 Worm   407 YVLVQFCKDCSPNAHIEMFITWLGYSNSAMNPIIYTVFNRDYQIALKRLFT 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 110/433 (25%)
TM helix 1 130..156 CDD:320193 7/25 (28%)
TM helix 2 163..189 CDD:320193 8/25 (32%)
TM helix 3 201..231 CDD:320193 14/29 (48%)
TM helix 4 243..265 CDD:320193 8/21 (38%)
TM helix 5 292..321 CDD:320193 10/38 (26%)
TM helix 6 371..401 CDD:320193 11/30 (37%)
TM helix 7 410..435 CDD:320193 14/25 (56%)
tyra-2NP_001033537.1 7tmA_amine_R-like 20..452 CDD:320098 110/433 (25%)
TM helix 1 20..46 CDD:320098 7/25 (28%)
TM helix 2 53..80 CDD:320098 8/26 (31%)
TM helix 3 91..121 CDD:320098 14/29 (48%)
TM helix 4 133..153 CDD:320098 7/19 (37%)
TM helix 5 182..379 CDD:320098 26/197 (13%)
TM helix 6 380..410 CDD:320098 11/29 (38%)
TM helix 7 420..445 CDD:320098 14/24 (58%)

Return to query results.
Submit another query.