DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R1 and Htr1d

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_032335.2 Gene:Htr1d / 15552 MGIID:96276 Length:374 Species:Mus musculus


Alignment Length:380 Identity:115/380 - (30%)
Similarity:175/380 - (46%) Gaps:84/380 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 EPEPLSL--VSIVVVGIFLSVLIFLSVAGNILVCLAIYTERSLRRIGNLFLASLAIADLFVASLV 181
            :||.|..  :|:|||   |||:...:|..|..|...|...:.|....|..:.|||..||.|:.||
Mouse    27 DPEVLQALRISLVVV---LSVITLATVLSNAFVLTTILLTKKLHTPANYLIGSLATTDLLVSILV 88

  Fly   182 MTFAGVNDLLGYWIFGAQFCDTWVAFDVMCSTASILNLCAISMDRYIHIKDPLRYGRWVTRRVAV 246
            |..:........|.||...||.||:.|:.|.|||||:||.|::|||..|.|.|.|.:..|...|.
Mouse    89 MPISIAYTTTRTWNFGQILCDIWVSSDITCCTASILHLCVIALDRYWAITDALEYSKRRTAGHAA 153

  Fly   247 ITIAAIWLLAAFVSFVPI---SLGIHRPDQPLIFEDNGKKYPTCALDLTP-TYAVVSSCISFYFP 307
            ..|||:|:::..:|..|:   ....|            ::...|.::.:. :|.:.|:|.:||.|
Mouse   154 AMIAAVWIISICISIPPLFWRQATAH------------EEMSDCLVNTSQISYTIYSTCGAFYIP 206

  Fly   308 CVVMIGIYCRLYCYAQKHVKSIKAVTRPGEVAEKQRYKSIRRPKNQPKKFKVRNL---------- 362
            .:::|.:|.|:|..|:..:                    :..|....|:|....|          
Mouse   207 SILLIILYGRIYVAARSRI--------------------LNPPSLYGKRFTTAQLITGSAGSSLC 251

  Fly   363 ---------HTHS--SPYHVS--------------------DHKAAVTVGVIMGVFLICWVPFFC 396
                     |||:  ||...:                    :.||..|:|:|:|.|:|||:|||.
Mouse   252 SLNPSLHESHTHTVGSPLFFNQVKIKLADSILERKRISAARERKATKTLGIILGAFIICWLPFFV 316

  Fly   397 VNITAAFCK-TC-IGGQTFKILTWLGYSNSAFNPIIYSIFNKEFRDAFKRILTMR 449
            |::....|: :| |....|...|||||.||..||:||::||::||.||::::..|
Mouse   317 VSLVLPICRDSCWIHPALFDFFTWLGYLNSLINPVIYTVFNEDFRQAFQKVVHFR 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 107/358 (30%)
TM helix 1 130..156 CDD:320193 9/25 (36%)
TM helix 2 163..189 CDD:320193 10/25 (40%)
TM helix 3 201..231 CDD:320193 17/29 (59%)
TM helix 4 243..265 CDD:320193 7/24 (29%)
TM helix 5 292..321 CDD:320193 10/29 (34%)
TM helix 6 371..401 CDD:320193 14/49 (29%)
TM helix 7 410..435 CDD:320193 12/24 (50%)
Htr1dNP_032335.2 7tm_GPCRs 32..364 CDD:475119 109/366 (30%)
TM helix 1 38..62 CDD:320455 10/26 (38%)
TM helix 2 71..93 CDD:320455 10/21 (48%)
TM helix 3 109..131 CDD:320455 13/21 (62%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250|UniProtKB:P41595 132..134 1/1 (100%)
TM helix 4 154..170 CDD:320455 5/15 (33%)
TM helix 5 192..215 CDD:320455 7/22 (32%)
TM helix 6 297..319 CDD:320455 12/21 (57%)
TM helix 7 332..357 CDD:320455 12/24 (50%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 349..353 2/3 (67%)

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