DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R1 and Htr1b

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_034612.1 Gene:Htr1b / 15551 MGIID:96274 Length:386 Species:Mus musculus


Alignment Length:398 Identity:111/398 - (27%)
Similarity:183/398 - (45%) Gaps:67/398 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 GTTLTSFYNESSWTNASEMDTIVGEEPEPLSLVSIVVVGIFLSVLIFLSVAGNILVCLAIYTERS 158
            |..||:..:..|.......|:|.  .|..:.||::      |:::...:...|..|...:|..|.
Mouse    19 GVPLTNLSHNCSADGYIYQDSIA--LPWKVLLVAL------LALITLATTLSNAFVIATVYRTRK 75

  Fly   159 LRRIGNLFLASLAIADLFVASLVMTFAGVNDLLGYWIFGAQFCDTWVAFDVMCSTASILNLCAIS 223
            |....|..:||||:.||.|:.|||..:.:..:.|.|..|...||.|::.|:.|.||||::||.|:
Mouse    76 LHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQVVCDFWLSSDITCCTASIMHLCVIA 140

  Fly   224 MDRYIHIKDPLRYGRWVTRRVAVITIAAIWLLAAFVSFVPISLGIHRPDQPLIFEDNGKKYPTCA 288
            :|||..|.|.:.|....|.:.|.|.|..:|:.:..:|..|......:.::.::         .|.
Mouse   141 LDRYWAITDAVEYSAKRTPKRAAIMIVLVWVFSISISLPPFFWRQAKAEEEML---------DCF 196

  Fly   289 LDLTPT-YAVVSSCISFYFPCVVMIGIYCRLYCYAQKHV------KSIKAVTR-------PGEVA 339
            ::.... |.|.|:..:||.|.:::|.:|.|:|..|:..:      |:.|.:||       ||..:
Mouse   197 VNTDHVLYTVYSTVGAFYLPTLLLIALYGRIYVEARSRILKQTPNKTGKRLTRAQLITDSPGSTS 261

  Fly   340 EKQRYKSIRRPKNQPKKFKVRNLHTHSSPYHVS--------------------DHKAAVTVGVIM 384
            ......|  |..:.|.:        ..||.:|:                    :.||..|:|:|:
Mouse   262 SVTSINS--RAPDVPSE--------SGSPVYVNQVKVRVSDALLEKKKLMAARERKATKTLGIIL 316

  Fly   385 GVFLICWVPFFCVNITAAFCK-TC-IGGQTFKILTWLGYSNSAFNPIIYSIFNKEFRDAFKRILT 447
            |.|::||:|||.:::....|| .| .....|....||||.||..|||||::.|::|:.||.:::.
Mouse   317 GAFIVCWLPFFIISLVMPICKDACWFHMAIFDFFNWLGYLNSLINPIIYTMSNEDFKQAFHKLIR 381

  Fly   448 MRNPWCCA 455
            .:    ||
Mouse   382 FK----CA 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 98/347 (28%)
TM helix 1 130..156 CDD:320193 4/25 (16%)
TM helix 2 163..189 CDD:320193 11/25 (44%)
TM helix 3 201..231 CDD:320193 15/29 (52%)
TM helix 4 243..265 CDD:320193 6/21 (29%)
TM helix 5 292..321 CDD:320193 10/29 (34%)
TM helix 6 371..401 CDD:320193 13/49 (27%)
TM helix 7 410..435 CDD:320193 12/24 (50%)
Htr1bNP_034612.1 7tmA_5-HT1B_1D 42..376 CDD:320455 101/358 (28%)
TM helix 1 47..73 CDD:320455 6/31 (19%)
TM helix 2 80..106 CDD:320455 11/25 (44%)
TM helix 3 118..148 CDD:320455 15/29 (52%)
DRY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 142..144 1/1 (100%)
TM helix 4 160..183 CDD:320455 6/22 (27%)
TM helix 5 201..230 CDD:320455 10/28 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..278 5/32 (16%)
TM helix 6 303..333 CDD:320455 12/29 (41%)
TM helix 7 344..369 CDD:320455 12/24 (50%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 361..365 3/3 (100%)

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