DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R1 and Htr1a

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_032334.2 Gene:Htr1a / 15550 MGIID:96273 Length:421 Species:Mus musculus


Alignment Length:392 Identity:120/392 - (30%)
Similarity:185/392 - (47%) Gaps:87/392 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 VVVGIFLSVLIFLSVAGNILVCLAIYTERSLRRIGNLFLASLAIADLFVASLVMTFAGVNDLLGY 193
            |:..:.|..|||.:|.||..|..||..||||:.:.|..:.|||:.||.|:.||:..|.:..:|..
Mouse    37 VITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNK 101

  Fly   194 WIFGAQFCDTWVAFDVMCSTASILNLCAISMDRYIHIKDPLRYGRWVTRRVAVITIAAIWLLAAF 258
            |..|...||.::|.||:|.|:|||:||||::|||..|.||:.|....|.|.|...|:..||:...
Mouse   102 WTLGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISLTWLIGFL 166

  Fly   259 VSFVPISLGIHRPDQPLIFEDNGKKYPT-CALDLTPTYAVVSSCISFYFPCVVMIGIYCRLYCYA 322
            :| :|..||...|:.        :..|. |.:.....|.:.|:..:||.|.::|:.:|.|::..|
Mouse   167 IS-IPPMLGWRTPED--------RSNPNECTISKDHGYTIYSTFGAFYIPLLLMLVLYGRIFRAA 222

  Fly   323 QKHV-KSIKAVTRPG-------------------------------------------------- 336
            :..: |::|.|.:.|                                                  
Mouse   223 RFRIRKTVKKVEKKGAGTSFGTSSAPPPKKSLNGQPGSGDCRRSAENRAVGTPCANGAVRQGEDD 287

  Fly   337 ---EVAEKQRYKS----IRRPKNQ------PKKFKVRNLHTHSSPYHVS---DHKAAVTVGVIMG 385
               ||.|..|..:    :..|...      |...:.:|..|..:...::   :.|...|:|:|||
Mouse   288 ATLEVIEVHRVGNSKGHLPLPSESGATSYVPACLERKNERTAEAKRKMALARERKTVKTLGIIMG 352

  Fly   386 VFLICWVPFFCVNITAAFCK-TC-----IGGQTFKILTWLGYSNSAFNPIIYSIFNKEFRDAFKR 444
            .|::||:|||.|.:...||: :|     :|.    |:.|||||||..||:||:.|||:|::|||:
Mouse   353 TFILCWLPFFIVALVLPFCESSCHMPELLGA----IINWLGYSNSLLNPVIYAYFNKDFQNAFKK 413

  Fly   445 IL 446
            |:
Mouse   414 II 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 115/385 (30%)
TM helix 1 130..156 CDD:320193 10/25 (40%)
TM helix 2 163..189 CDD:320193 10/25 (40%)
TM helix 3 201..231 CDD:320193 17/29 (59%)
TM helix 4 243..265 CDD:320193 7/21 (33%)
TM helix 5 292..321 CDD:320193 8/28 (29%)
TM helix 6 371..401 CDD:320193 13/32 (41%)
TM helix 7 410..435 CDD:320193 12/24 (50%)
Htr1aNP_032334.2 7tmA_5-HT1A_vertebrates 37..411 CDD:320453 116/386 (30%)
TM helix 1 38..64 CDD:320453 10/25 (40%)
TM helix 2 71..97 CDD:320453 10/25 (40%)
TM helix 3 109..139 CDD:320453 17/29 (59%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250|UniProtKB:P41595 133..135 1/1 (100%)
TM helix 4 151..173 CDD:320453 7/22 (32%)
TM helix 5 192..221 CDD:320453 8/28 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 237..268 1/30 (3%)
TM helix 6 338..368 CDD:320453 13/29 (45%)
TM helix 7 379..404 CDD:320453 13/28 (46%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 396..400 2/3 (67%)

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