DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R1 and Octbeta2R

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:XP_003436280.1 Gene:Octbeta2R / 1273081 VectorBaseID:AGAMI1_002356 Length:526 Species:Anopheles gambiae


Alignment Length:564 Identity:164/564 - (29%)
Similarity:254/564 - (45%) Gaps:129/564 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TNAMRAIAAIAAGVGSVAATVATSTTSSISSSTTIIN--------------TSSATTIGGNHTSG 52
            ||.|.:.::.::.:.|.||.:|  :|..::..|.:.|              .|:|:..|......
Mosquito    10 TNYMVSSSSSSSHLQSAAALLA--STFGLADGTVLYNHSVRDRGDAGALAAASAASVAGTGGLES 72

  Fly    53 STGFSTNSTLLDADHLPLQL----TTAKVDLDIEIDIQLLTNGYDGTTLTSFYNESSWTNASEMD 113
            :|......::.||....:.|    :||.:               .||..|...|||.....  :|
Mosquito    73 ATAGGDTLSVFDASGSSIMLQGFSSTAPI---------------GGTIETVGANESIVDGG--ID 120

  Fly   114 TIVGEEPEPLSLVSIVVVGIFLSVLIFLSVA---GNILVCLAIYTERSLRRIGNLFLASLAIADL 175
            ...||      .:.:|::.:..|:::|:.||   ||:||.:::...|.||.|.|.|:.|||:||:
Mosquito   121 AGGGE------WIDVVLLVLKASIMMFIIVAAIFGNLLVIISVKRHRKLRVITNYFVVSLAMADI 179

  Fly   176 FVASLVMTFAGVNDLLGYWIFGAQFCDTWVAFDVMCSTASILNLCAISMDRYIHIKDPLRYGRWV 240
            .||.:.|||.....:.|.|.||:..||.|.:.||..||||||:||.||:|||..|..||:|...:
Mosquito   180 MVAMMAMTFNFSVQITGSWKFGSFMCDVWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISM 244

  Fly   241 TRRVAVITIAAIWLLAAFVSFVPISLG-----------IHRPDQPLIFEDNGKKYPTCALDLTPT 294
            |:||..|.:...|:..|.:|||||..|           :..||             :|...:...
Mosquito   245 TKRVVAIMLLNTWISPALLSFVPIFAGWYTTEKHKQEVLDNPD-------------SCLFIVNKP 296

  Fly   295 YAVVSSCISFYFPCVVMIGIYCRLYCYAQKHVKSIKAVTRPGEVAEKQRYKSIRRPKNQ------ 353
            |||:||.|||:.||.:|:..|.:::..|.:..|         ::|.:|....:....|.      
Mosquito   297 YAVISSSISFFIPCTIMVFTYFQIFREANRQEK---------QLALRQGTAMLMHQHNTGGGVGG 352

  Fly   354 --------------PKKFKVRNLH------THSSPYHV----SDHKAAVTVGVIMGVFLICWVPF 394
                          ....|...||      |.:...|:    .:||||.|:|:|||.|::||:||
Mosquito   353 GGSGGGTNGEALSGSGSSKTLTLHEVDAEQTPTKDRHLIKMKREHKAARTLGIIMGTFILCWLPF 417

  Fly   395 FCVNITAAFCKTCIGGQ-TFKILTWLGYSNSAFNPIIYSIFNKEFRDAFKRILTMRNPWC--CA- 455
            |...|..:.|..|.... ...::.|:||.||..||:||:.||::||:||:..|.     |  || 
Mosquito   418 FLWYIITSLCDRCPNPDIVVALVFWIGYFNSTLNPLIYAYFNRDFREAFRNTLD-----CMFCAW 477

  Fly   456 -------QDVGNIHPRNSDRFITDYAAKNVVVMNSGRSSAELEQ 492
                   .|: |:. |.|.|:  |..||:|...:..|.|::.::
Mosquito   478 WRRETSPLDI-NVR-RASLRY--DCRAKSVYSESYLRPSSQTDR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 118/356 (33%)
TM helix 1 130..156 CDD:320193 8/28 (29%)
TM helix 2 163..189 CDD:320193 12/25 (48%)
TM helix 3 201..231 CDD:320193 18/29 (62%)
TM helix 4 243..265 CDD:320193 9/21 (43%)
TM helix 5 292..321 CDD:320193 12/28 (43%)
TM helix 6 371..401 CDD:320193 16/33 (48%)
TM helix 7 410..435 CDD:320193 9/25 (36%)
Octbeta2RXP_003436280.1 7tmA_DmOct-betaAR-like 134..466 CDD:320194 118/353 (33%)
TM helix 1 134..160 CDD:320194 8/25 (32%)
TM helix 2 167..193 CDD:320194 12/25 (48%)
TM helix 3 205..235 CDD:320194 18/29 (62%)
TM helix 4 247..270 CDD:320194 10/22 (45%)
TM helix 5 294..323 CDD:320194 12/28 (43%)
TM helix 6 394..424 CDD:320194 16/29 (55%)
TM helix 7 434..459 CDD:320194 9/24 (38%)

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