DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R1 and adra2c

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001120375.1 Gene:adra2c / 100145449 XenbaseID:XB-GENE-5773399 Length:433 Species:Xenopus tropicalis


Alignment Length:409 Identity:128/409 - (31%)
Similarity:202/409 - (49%) Gaps:94/409 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 PLSLVSIVVVGIFLSVLIFLSVAGNILVCLAIYTERSLRRIGNLFLASLAIADLFVASLVMTFAG 186
            |.|:.|:..:...:..||..::.||:.|.:|:.|.|:|:...||||.|||.||:.||:|||.|:.
 Frog    25 PYSMTSVWCLAAIVGFLIIFTIVGNVFVVIAVLTSRALKAPQNLFLVSLASADILVAALVMPFSL 89

  Fly   187 VNDLLGYWIFGAQFCDTWVAFDVMCSTASILNLCAISMDRYIHIKDPLRYG-RWVTRRVAVITIA 250
            .|:|:|||.||..:||.::|.||:..|:||::|||||:|||..:...:.|. :...||:..| |.
 Frog    90 ANELMGYWYFGNVWCDIYLALDVLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRIKGI-IV 153

  Fly   251 AIWLLAAFVSFVPISLGIHRPDQPLIFEDNGKKYPTCALDLTPTYAVVSSCI-SFYFPCVVMIGI 314
            .:||::|.:||.|: :.:.|..     ||:  .||.|.|: ..|:.::|||| ||:.||::||.:
 Frog   154 TVWLISAVISFPPL-ISMDRDT-----EDD--VYPQCKLN-DDTWYILSSCIGSFFAPCIIMILV 209

  Fly   315 YCRLYCYAQKHVKSI--KAVTR------------------PGE---------------------- 337
            |.|:|..|:...:::  |..||                  ||:                      
 Frog   210 YIRIYQVAKLRTRTLSEKKPTRDGSSHTENGFSKGTTVKMPGDKENGHCPPRPSPPKATDVEDLE 274

  Fly   338 -----VAEKQRYKSIRRPKN---------------------------------QPKKFKVRNLHT 364
                 ::|.:|.||..:..|                                 ..:|.|.|:..:
 Frog   275 LEESSMSESKRRKSSSKEDNTDSSKERKCSKGNSFSKQSSRLSRTSNKSMELFSSRKKKKRSSVS 339

  Fly   365 HSSPYHVSDHKAAVTVGVIMGVFLICWVPFFCVNITAAFCK-TCIGGQT-FKILTWLGYSNSAFN 427
            ........:.:....:.|:||||::||.|||........|: .|...:| ||...|:||.||:.|
 Frog   340 RRKLSQAREKRFTFVLAVVMGVFVVCWFPFFFSYSLYGICREACEVPETLFKFFFWIGYCNSSLN 404

  Fly   428 PIIYSIFNKEFRDAFKRIL 446
            |:||:|||::||.:||:|:
 Frog   405 PVIYTIFNQDFRRSFKKII 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 122/395 (31%)
TM helix 1 130..156 CDD:320193 6/25 (24%)
TM helix 2 163..189 CDD:320193 15/25 (60%)
TM helix 3 201..231 CDD:320193 16/29 (55%)
TM helix 4 243..265 CDD:320193 9/21 (43%)
TM helix 5 292..321 CDD:320193 14/29 (48%)
TM helix 6 371..401 CDD:320193 10/29 (34%)
TM helix 7 410..435 CDD:320193 13/25 (52%)
adra2cNP_001120375.1 7tmA_alpha2C_AR 32..419 CDD:320446 122/396 (31%)
TM helix 1 33..59 CDD:320446 6/25 (24%)
TM helix 2 66..92 CDD:320446 15/25 (60%)
TM helix 3 104..134 CDD:320446 16/29 (55%)
TM helix 4 146..169 CDD:320446 10/24 (42%)
TM helix 5 187..216 CDD:320446 14/28 (50%)
TM helix 6 346..376 CDD:320446 10/29 (34%)
TM helix 7 387..412 CDD:320446 13/24 (54%)

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