DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R1 and htr1aa

DIOPT Version :10

Sequence 1:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001116793.1 Gene:htr1aa / 100001828 ZFINID:ZDB-GENE-071203-1 Length:398 Species:Danio rerio


Alignment Length:424 Identity:129/424 - (30%)
Similarity:202/424 - (47%) Gaps:88/424 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 YDGTTLTSFYNESSWT-NASEMDTIVGEEPEPLSLVSIVVVG-IFLSVLIFLSVAGNILVCLAIY 154
            |:.||     ....|: ||:.:..:.         :|..::| :||:.||..::.||..|..||.
Zfish     4 YNNTT-----ESQDWSGNATSVSEVA---------LSYQIIGSLFLAALILFAILGNACVIAAIA 54

  Fly   155 TERSLRRIGNLFLASLAIADLFVASLVMTFAGVNDLLGYWIFGAQFCDTWVAFDVMCSTASILNL 219
            .||||:.:.|..:.|||:.||.|:.||:..|.:..:|..|..|.:.||.:::.||:|.|:|||:|
Zfish    55 LERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKWTLGQEMCDIFISLDVLCCTSSILHL 119

  Fly   220 CAISMDRYIHIKDPLRYGRWVTRRVAVITIAAIWLLAAFVSFVPISLGIHRPDQPLIFEDNGKKY 284
            |||::|||..|.||:.|....|.|.|.|.|:..||:...:| :|..||..:|      ||.... 
Zfish   120 CAIALDRYWAITDPIDYVNKRTPRRAAILISLTWLIGFSIS-IPPMLGWRKP------EDRADP- 176

  Fly   285 PTCALDLTPTYAVVSSCISFYFPCVVMIGIYCRLYCYAQKHVKSIKAVTRPGEVAEK-------- 341
            ..|.:.....|.:.|:..:||.|.::|:.:|.|::..|:..::.....|...::|:|        
Zfish   177 DACTISQDHGYTIYSTFGAFYIPLILMLVLYGRIFRAARFRIRKTVKKTEKAKIADKCLAVSPAL 241

  Fly   342 -------QRYKSIRR----------------------------------PKNQPKKFKVRNLHTH 365
                   :..|:.||                                  |.|....|:.||....
Zfish   242 FPRKANGEVGKTWRRSVEPCANGALKNSDDGESFEITEVQSISKNHLSLPNNPQPCFENRNEKNT 306

  Fly   366 SSPYHVS---DHKAAVTVGVIMGVFLICWVPFFCVNITAAFCKTC-----IGGQTFKILTWLGYS 422
            .:...|:   :.|...|:|:|||.|:.||:|||.|.:...||:.|     :|.    ::.|||||
Zfish   307 EAKRKVALARERKTVKTLGIIMGTFIFCWLPFFIVALVLPFCQDCFMPEWLGA----VINWLGYS 367

  Fly   423 NSAFNPIIYSIFNKEFRDAFKRILTMRNPWCCAQ 456
            ||..||:||:.|||:|::|||:||..:   |..|
Zfish   368 NSLLNPVIYAYFNKDFQNAFKKILKCK---CIRQ 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 115/369 (31%)
TM helix 1 130..156 CDD:320193 10/26 (38%)
TM helix 2 163..189 CDD:320193 10/25 (40%)
TM helix 3 201..231 CDD:320193 16/29 (55%)
TM helix 4 243..265 CDD:320193 8/21 (38%)
TM helix 5 292..321 CDD:320193 8/28 (29%)
TM helix 6 371..401 CDD:320193 14/32 (44%)
TM helix 7 410..435 CDD:320193 11/24 (46%)
htr1aaNP_001116793.1 7tm_GPCRs 29..387 CDD:475119 115/369 (31%)
TM helix 1 31..55 CDD:410628 10/23 (43%)
TM helix 2 64..86 CDD:410628 9/21 (43%)
TM helix 3 102..124 CDD:410628 12/21 (57%)
TM helix 4 147..163 CDD:410628 5/16 (31%)
TM helix 5 185..208 CDD:410628 6/22 (27%)
TM helix 6 321..343 CDD:410628 12/21 (57%)
TM helix 7 355..380 CDD:410628 12/28 (43%)

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