DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3199 and cyt1l

DIOPT Version :9

Sequence 1:NP_650342.2 Gene:CG3199 / 41725 FlyBaseID:FBgn0038210 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001076351.1 Gene:cyt1l / 792062 ZFINID:ZDB-GENE-061026-4 Length:429 Species:Danio rerio


Alignment Length:206 Identity:42/206 - (20%)
Similarity:81/206 - (39%) Gaps:58/206 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KGKKGKKSVFRAKSTVVPTAPPEPVFDRNLPVFSFDLVITRLEVKGVVLADARKLLVKVKFG-GN 71
            |.:|..:|.|:|||..:         ::.:.|.:..|..:|.|:     .:.::.|..::.. .:
Zfish   264 KNRKDLESWFQAKSESL---------NKEVAVSTETLQTSRSEI-----TEVKRTLQSLEIELQS 314

  Fly    72 NLSLTASRTNVSEFKPNASHTFQAEPPNLAQTVEENGIDFEV-VYDEQVVGLGKLSLPKRLSTRI 135
            .||:.||      .:...:.| ||...|:.     ||..|:| ..:||::.|           |.
Zfish   315 QLSMKAS------LEGTLADT-QARYTNML-----NGYQFQVSSLEEQLIQL-----------RA 356

  Fly   136 KLDMKAFSYTSTCPLEMEGKPVGALEFLCKLFIKCGDYAR--EGETCPNLDRNLSPRDIVFVV-- 196
            .|:.:...|..            .|:...:|.::..:|.|  :||.......:.:.|.:|.:|  
Zfish   357 DLERQGQEYQM------------LLDIKTRLEMEIAEYRRLLDGEATSVSTSSSTTRKVVTIVEE 409

  Fly   197 ---GKSQANTS 204
               ||..:::|
Zfish   410 VVDGKVVSSSS 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3199NP_650342.2 DUF4788 45..>216 CDD:292651 33/169 (20%)
cyt1lNP_001076351.1 Filament 81..389 CDD:278467 34/173 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28M49
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.