DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3199 and Krt24

DIOPT Version :9

Sequence 1:NP_650342.2 Gene:CG3199 / 41725 FlyBaseID:FBgn0038210 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001004131.1 Gene:Krt24 / 287675 RGDID:1303157 Length:491 Species:Rattus norvegicus


Alignment Length:116 Identity:28/116 - (24%)
Similarity:38/116 - (32%) Gaps:38/116 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 NASHTFQAEPPNLAQTVEENGIDFEVVYDEQ----------VVGLGKLSLPKRLSTRIKLDMKAF 142
            ||....|.:...||..      ||.:.|:.:          :.||.|: |.:...||..|:|:..
  Rat   189 NARLALQIDNARLAAD------DFRMKYEHELCLRQSLEADINGLRKV-LDEMTMTRCDLEMQIE 246

  Fly   143 SYTSTCPLEMEGKPVGALEFLCKLF---IKC------GDYAREGETCPNLD 184
            ..|.            .|.||.|..   :||      ||...|....|..|
  Rat   247 GLTE------------ELVFLRKNHEEEMKCLQGSSGGDVTVEMNATPGTD 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3199NP_650342.2 DUF4788 45..>216 CDD:292651 28/116 (24%)
Krt24NP_001004131.1 Head 1..117
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
Filament 117..427 CDD:278467 28/116 (24%)
Coil 1A 118..153
Linker 1 154..174
Coil 1B 175..266 22/95 (23%)
Linker 12 267..289 5/19 (26%)
Coil 2 290..428
Tail 429..491
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28M49
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.